1-BIN-301, 2-AIN-501 Methods in Bioinformatics

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| style="background:#f0f0f0" | '''Dátum zverejnenia'''
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| style="background:#f0f0f0" | '''When published'''
| style="background:#f0f0f0" | '''Termín odovzdania'''  
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| style="background:#f0f0f0" | '''Deadline for submitting'''  
| style="background:#f0f0f0" | '''Zadanie'''
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{{DU | Quizes (Slovak only) | Each Thursday 19:00  | Next Wednesday 22:00 }}
{{DU | Domáca úloha 1 | 15.10.2015 | 4.11.2015 do 9:00| {{pdf|du1}} | Sekvenovanie, zarovnávanie <br>Súbory pre biológov: [http://compbio.fmph.uniba.sk/vyuka/mbi-data/du1/du1-b.xls Excelová tabuľka]}}
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{{DUviac}} [https://moodle.uniba.sk/course/view.php?id=2160 Quizzes in Moodle]
{{DU | Domáca úloha 2 | 12.11.2015 | 2.12.2015 do 9:00 | {{pdf|du2}} | HMM, evolúcia, komparatívna genomika<!-- <br>Súbory pre informatikov: [[Media:Du2-i.zip|zip]] --> }}
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{{DU | Domáca úloha 3 | 3.12.2015 | 16.12.2015 do 9:00 | {{pdf|du3}} | Expresia, proteíny, RNA <!-- <br>Proteínová sekvencia: [[DU3-prot]] --> }}
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{{DU | Homework 1 | Oct. 20, 2023 | Nov. 8, 2023 22:00}}
{{DU | Výber článku na journal club | 9.10.2015 | 21.10.2015 do 22:00 | [[Články_na_journal_club|zoznam článkov a formulár]] | Vyplňte formulár}}
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{{DUviac}} Sequencing, alignment<br>Biologists: questions {{pdf|a1b}}, [https://compbio.fmph.uniba.sk/vyuka/mbi-data/du1/du1-b.xls Excel table], [https://moodle.uniba.sk/mod/assign/view.php?id=40956 Moodle]<br>Computer science: questions {{pdf|hw1}}, [https://compbio.fmph.uniba.sk/vyuka/mbi-data/du1/hw1-template.ipynb notebook template], [https://moodle.uniba.sk/mod/assign/view.php?id=40955 Moodle]
{{DU | Správa zo journal clubu | | 18.12.2015 do 22:00|  | E-mailom B. Brejovej v pdf formáte }}
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{{DU | Návrhy projektov | | 15.12.2015 do 22:00 | | E-mailom B. Brejovej }}
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{{DU | Homework 2 | Nov. 9, 2023 | Nov. 29, 2023 22:00 }}
{{DU | Odovzdanie projektov |  | 22.1.2016 do 22:00 | | E-mailom B. Brejovej }}
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{{DUviac}} Evolution, comparative genomics <br>Biologists: questions {{pdf|a2b}}, [https://moodle.uniba.sk/mod/assign/view.php?id=40958 Moodle]<br>Computer science: questions {{pdf|a2i-en}}, data [https://compbio.fmph.uniba.sk/vyuka/mbi-data/a2-i.zip zip], [https://moodle.uniba.sk/mod/assign/view.php?id=40957 Moodle]  
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{{DU | Homework 3 | Nov. 30, 2023 | Dec. 13, 2023 22:00 }}
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{{DUviac}} Proteins, RNA<br>Biologists: questions {{pdf|a3b-en}}, [https://moodle.uniba.sk/mod/assign/view.php?id=116962 Moodle]<br>Computer science: questions {{pdf|a3i-en}}, [https://moodle.uniba.sk/mod/assign/view.php?id=116961 Moodle]<br>Both: [https://compbio.fmph.uniba.sk/vyuka/mbi-data/a3.fasta sequence], AlphaFold2 results for [https://compbio.fmph.uniba.sk/vyuka/mbi-data/a3-orf1.png orf1], [https://compbio.fmph.uniba.sk/vyuka/mbi-data/a3-orf3.png orf3]
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{{DU | Journal club paper selection | Oct. 12, 2023 | Oct. 18, 2023 22:00 | [[Journal club papers|list of papers and form]] }}
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{{DUviac}} Please submit the form
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{{DU | Journal club report | | Dec. 15, 2023 22:00| }}
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{{DUviac}} Submit in [https://moodle.uniba.sk/mod/assign/view.php?id=40960 Moodle] (1x per group)
 
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Domáce úlohy odovzdávajte v papierovej podobe pod dvere kancelárie M163 alebo na vyučovacej hodine, najneskôr do uvedeného termínu.
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All assignments should be submitted to Moodle as a pdf (or as directed in the assignment) before the specified deadline.

Verzia zo dňa a času 16:21, 30. november 2023

When published Deadline for submitting
Quizes (Slovak only) Each Thursday 19:00 Next Wednesday 22:00
Quizzes in Moodle
Homework 1 Oct. 20, 2023 Nov. 8, 2023 22:00
Sequencing, alignment
Biologists: questions pdf, Excel table, Moodle
Computer science: questions pdf, notebook template, Moodle
Homework 2 Nov. 9, 2023 Nov. 29, 2023 22:00
Evolution, comparative genomics
Biologists: questions pdf, Moodle
Computer science: questions pdf, data zip, Moodle
Homework 3 Nov. 30, 2023 Dec. 13, 2023 22:00
Proteins, RNA
Biologists: questions pdf, Moodle
Computer science: questions pdf, Moodle
Both: sequence, AlphaFold2 results for orf1, orf3
Journal club paper selection Oct. 12, 2023 Oct. 18, 2023 22:00
Please submit the form
Journal club report Dec. 15, 2023 22:00
Submit in Moodle (1x per group)

All assignments should be submitted to Moodle as a pdf (or as directed in the assignment) before the specified deadline.