http://compbio.fmph.uniba.sk/vyuka/mbi/index.php?title=MBI_2009/2010&feed=atom&action=history
MBI 2009/2010 - História úprav
2024-03-28T11:26:54Z
História úprav pre túto stránku na wiki
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http://compbio.fmph.uniba.sk/vyuka/mbi/index.php?title=MBI_2009/2010&diff=944&oldid=prev
Brona na 18:30, 1. október 2014
2014-10-01T18:30:04Z
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<td colspan='2' style="background-color: white; color:black; text-align: center;">← Staršia verzia</td>
<td colspan='2' style="background-color: white; color:black; text-align: center;">Verzia zo dňa a času 18:30, 1. október 2014</td>
</tr><tr><td colspan="2" class="diff-lineno">Riadok 448:</td>
<td colspan="2" class="diff-lineno">Riadok 448:</td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* Na dalsej obazovke zaklikneme show nucleotides. Z primatov zvolime chimp, rhesus, tarsier, z inych cicavcov mouse, rat, dog, elephant a z dalsich organizmov opposum, platypus, chicken, lizard, stalcime Get output.</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* Na dalsej obazovke zaklikneme show nucleotides. Z primatov zvolime chimp, rhesus, tarsier, z inych cicavcov mouse, rat, dog, elephant a z dalsich organizmov opposum, platypus, chicken, lizard, stalcime Get output.</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* Vystup ulozime do suboru, z mien sekvencii zmazeme spolocny prefix NM_018945_, pripadne celkovo prepiseme mena na anglicke nazvy</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* Vystup ulozime do suboru, z mien sekvencii zmazeme spolocny prefix NM_018945_, pripadne celkovo prepiseme mena na anglicke nazvy</div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>** Tento subor mozete najst [[Evolucia-CB-zarovnanie|tu]]</div></td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>** Tento subor mozete najst [[<ins class="diffchange diffchange-inline">#</ins>Evolucia-CB-zarovnanie|tu]]</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* Skusme zostavit strom na stranke http://mobyle.pasteur.fr/cgi-bin/portal.py</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* Skusme zostavit strom na stranke http://mobyle.pasteur.fr/cgi-bin/portal.py</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* Pozuijeme program quicktree, metodu neighbor joining, bootstrap 100  </div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* Pozuijeme program quicktree, metodu neighbor joining, bootstrap 100  </div></td></tr>
<tr><td colspan="2" class="diff-lineno">Riadok 480:</td>
<td colspan="2" class="diff-lineno">Riadok 480:</td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* HAR1F je exprimovany v neokortexe u 7 a 9 tyzdennych embrii, neskor aj v inych castiach mozgu (u cloveka aj inych primatov)</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* HAR1F je exprimovany v neokortexe u 7 a 9 tyzdennych embrii, neskor aj v inych castiach mozgu (u cloveka aj inych primatov)</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* vsetky substitucie v cloveku A/T->C/G, stabilnejsia RNA struktura (ale tiez su blizko k telomere, kde je viacej takychto mutacii kvoli rekombinacii a biased gene conversion)</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* vsetky substitucie v cloveku A/T->C/G, stabilnejsia RNA struktura (ale tiez su blizko k telomere, kde je viacej takychto mutacii kvoli rekombinacii a biased gene conversion)</div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;"></ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">==Evolucia-CB-zarovnanie==</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;"><pre></ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">>human</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;"></ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">ATGTCTTGTTTAATGGTTGAGAGGTGTGGCGAAATCTTGTTTGAGAACCCCGATCAGAATGCCAAATGTGTTTGCATGCTGGGAGATATACGACTAAGGGGTCAGACGGGGGTTCGTGCTGAACGCCGTGGCTCCTACCCATTCATTGACTTCCGCCTACTTAACAGTACAACATACTCAGGGGAGATTGGCACCAAGAAAAAGGTGAAAAGACTATTAAGCTTTCAAAGATACTTCCATGCATCAAGGCTGCTTCGTGGAATTATACCACAAGCCCCTCTGCACCTGCTGGATGAAGACTACCTTGGACAAGCAAGGCATATGCTCTCCAAAGTGGGAATGTGGGATTTTGACATTTTCTTGTTTGATCGCTTGACAAATGGAAACAGCCTGGTAACACTGTTGTGCCACCTCTTCAATACCCATGGACTCATTCACCATTTCAAGTTAGATATGGTGACCTTACACCGATTTTTAGTCATGGTTCAAGAAGATTACCACAGCCAAAACCCGTATCACAATGCTGTTCACGCAGCCGACGTCACCCAGGCCATGCACTGCTACCTGAAAGAGCCAAAGCTTGCCAGCTTCCTCACGCCTCTGGACATCATGCTTGGACTGCTGGCTGCAGCAGCACACGATGTGGACCACCCAGGGGTGAACCAGCCATTTTTGATAAAAACTAACCACCATCTTGCAAACCTATATCAGAATATGTCTGTGCTGGAGAATCATCACTGGCGATCTACAATTGGCATGCTTCGAGAATCAAGGCTTCTTGCTCATTTGCCAAAGGAAATGACACAGGATATTGAACAGCAGCTGGGCTCCTTGATCTTGGCAACAGACATCAACAGGCAGAATGAATTTTTGACCAGATTGAAAGCTCACCTCCACAATAAAGACTTAAGACTGGAGGATGCACAGGACAGGCACTTTATGCTTCAGATCGCCTTGAAGTGTGCTGACATTTGCAATCCTTGTAGAATCTGGGAGATGAGCAAGCAGTGGAGTGAAAGGGTCTGTGAAGAATTCTACAGGCAAGGTGAACTTGAACAGAAATTTGAACTGGAAATCAGTCCTCTTTGTAATCAACAGAAAGATTCCATCCCTAGTATACAAATTGGTTTCATGAGCTACATCGTGGAGCCGCTCTTCCGGGAATGGGCCCATTTCACGGGTAACAGCACCCTGTCGGAGAACATGCTGGGCCACCTCGCACACAACAAGGCCCAGTGGAAGAGCCTGTTGCCCAGGCAGCACAGAAGCAGGGGCAGCAGTGGCAGCGGGCCTGACCACGACCACGCAGGCCAAGGGACTGAGAGCGAGGAGCAGGAAGGCGACAGCCCCTAG</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">>chimp</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;"></ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">ATGTCTTGTTTAATGGTTGAGAGGTGTGGCGAAATCTTGTTTGAGAACCCCGATCAGAATGCCAAATGTGTTTGCATGCTGGGAGATATACGACTAAGGGGTCAGACGGGGGTTCCTGCTGAACGCCGTGGCTCCTACCCATTCATTGACTTCCGCCTACTTAACAGTACAACATACTCAGGGGAGATTGGCACCAAGAAAAAGGTGAAAAGACTATTAAGCTTTCAAAGATACTTCCATGCATCAAGGCTGCTTCGTGGAATTATACCACAAGCCCCTCTGCACCTGCTGGATGAAGACTACCTTGGACAAGCAAGGCATATGCTCTCCAAAGTGGGAATGTGGGATTTTGACATTTTCTTGTTTGATCGCTTGACAAATGGAAACAGCCTGGTAACACTGTTGTGCCACCTCTTCAATACCCATGGACTCATTCACCATTTCAAGTTAGATATGGTGACCTTACACCGATTTTTAGTCATGGTTCAAGAAGATTACCACAGCCAAAACCCGTATCACAATGCTGTTCATGCAGCCGACGTCACCCAGGCCATGCACTGCTACCTGAAAGAGGCAAAGCTCGCCAGCTTCCTCACGCCTCTGGACATCATGCTTGGACTGCTGGCTGCAGCAGCACACGATGTGGACCACCCAGGGGTGAACCAGCCATTTTTGATAAAAACTAACCACCATCTTGCAAACCTATATCAGAATATGTCTGTGCTGGAGAATCACCACTGGCGATCTACAATTGGCATGCTTCGAGAATCAAGGCTTCTTGCTCACTTGCCAAAGGAAATGACACAGGATATTGAACAGCAGCTGGGCTCCTTGATCTTGGCAACAGACATCAACAGGCAGAATGAATTTTTGACCAGATTGAAAGCTCACCTCCACAATAAAGACTTAAGACTGCAGGATGCACAGGACAGGCACTTTATGCTTCAGATCGCCTTGAAGTGTGCTGACATTTGCAATCCTTGTAGAATCTGGGAGATGAGCAAGCAGTGGAGTGAAAGGGTCTGTGAAGAATTCTACAGGCAAGGTGAACTTGAACAGAAATTTGAACTGGAAATCAGTCCTCTTTGTAATCAACAGAAAGATTCCATCCCTAGTATACAAATTGGTTTCATGAGCTACATCGTGGAGCCGCTCTTCCGGGAATGGGCCCATTTCACGGGTAACAGCACCCTGTCGGAGAACATGCTGGGCCACCTCGCACACAACAAGGCCCAGTGGAAGAGCCTGTTGCCCAGGCAGCACAGAAGCAGGGGCAGCAGTGGCAGCGGGCCTGACCACGACCACGCAGGCCAAGGGACTGAGAGCGAGGAGCAGGAAGGCGACAGCCCCTAG</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">>rhesus</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;"></ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">ATGTCTTGTTTAATGGTTGAGAGGTGTGGCGAAATCTTGTTTGAGAACCCCGATCAGAATGCCAAATGTGTTTGCATGCTGGGAGATATACGACTAAGGGGTCAGACGGGGGTTCCTGCTGAACGCCGTGGTTCCTACCCATTCATTGATTTCCGCCTACTTAACAATACAACATACTCAGGGGAGATTGGCACCAAGAAAAAGGTGAAAAGACTATTAAGCTTTCAAAGATACTTCCATGCATCAAGGCTGCTTCGTGGAATTATACCACAAGCCCCTCTCCACCTGCTGGATGAAGACTACCTTGGACAAGCAAGGCATATGCTCTCCAAAGTGGGAATGTGGGATTTTGACATTTTCTTGTTTGATCGCTTGACAAATGGAAACAGCCTGGTAACACTGCTGTGCCACCTCTTCAATTCCCATGGACTTATTCACCATTTCAAGTTAGATATGGTGACCTTACACCGATTTTTAGTCATGGTTCAAGAAGATTACCACAGCCAAAACCCGTATCACAATGCTGTTCACGCAGCTGATGTCACCCAGGCCATGCACTGCTACCTGAAAGAGCCAAAGCTCGCCAGCTTCCTCACACCTCTGGACATCATGCTTGGACTGCTGGCTGCAGCAGCACACGATGTGGACCACCCAGGGGTGAACCAGCCATTTTTGATAAAAACTAACCACCATCTTGCCAACCTATATCAGAATATGTCTGTCCTGGAGAATCACCACTGGCGATCTACAATTGGCATGCTTCGAGAATCAAGGCTTCTTGCTCACTTGCCAAAGGAAATGACACAGGATATTGAACAGCAGCTGGGCTCCTTGATCTTGGCAACAGACATCAACAGGCAGAATGAATTTTTGACCAGATTGAAAGCTCACCTCCACAATAAAGACTTAAGACTGGAGAATGCACACGACAGGCACTTTATGCTTCAGATCGCCTTGAAGTGTGCCGACATTTGCAATCCTTGTAGAATCTGGGAGATGAGCAAGCAGTGGAGTGAAAGGGTCTGTGAAGAATTCTACAGGCAAGGTGAACTTGAACAGAAATTTGAACTGGAAATCAGTCCTCTTTGTAATCAACAGAAAGATTCCATCCCTAGTATACAAATTGGTTTCATGAGCTACATCGTGGAGCCGCTCTTCCGGGAATGGGCCCATTTCACAGGAAACAGCGCACTGTCGGAGAACATGCTGGGTCACCTCGCGCACAACAAGGCCCAGTGGAAGAGCCTGTTGCCCAGGCAGCACAGAAGCAGGGGCAGCAGTGGCAGCGGGCCCGATCAGGACCACGCAGGCCAAGGGACTGAGAGCGAGGAGCAGGAAGGCGACAGCCCCTAG</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">>tarsier</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;"></ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">ATGTCTTGTTTAATGGTTGAGAGGTGTGGCGAAATCCTGTTTGAGAACCCTGATCAGAATGCCAAATGTGTTTGCATGCTAGGAGATGTACGACTAAGGGGTCAGACGGGGGTTCCCGCTGAACGCCGTGGCTCCTACCCATTCATTGACTTCCGCCTACTTAACAATACAACATACTCAGGGGAAATTGGCACCAAGATAAAGGTGAAAAGACTTTTAAGCTTTCAAAGATACTTCCATGCATCAAGGCTGCTTCGTGGAATTATACCACAAGCTCCTCTCCACCTGCTGGATGAAGACTATCTTGGACAAGCAAGG----------------------------------------------------------------GAAACAGCCTGGTAACCCTGCTGTGCCACCTGTTCAACACCCATGGACTCATTCACCATTTCAAGTTAGATATGGTGACCTTACACCGATTTTTAGTCATGGTTCAAGAAGATTACCACAGCCAAAACCCGTATCACAATGCCGTTCACGCGGCCGACGTCACCCAGGCCATGCACTGCTACCTAAAGGAACCAAAGCTTGCCAACTTCCTCACGCCTCTGGACATTATGCTTGGACTGCTGGCTGCAGCAGCTCACGATGTCGATCACCCAGGGGTGAACCAGCCATTTTTGGTCAAAACTAACCACCACCTTGCCAACCTATATCAGAATATGTCTGTGCTGGAGAATCACCACTGGCGATCTACAATTGGCATGCTTCGAGAATCAAGGCTTCTTGCTCACTTGCCAAAGGAAATGAC-------------------------------------------------------------------------------------------------------------------------------------------------ATCGCCTTGAAGTGTGCTGACATTTGCAATCCTTGTAGAATCTGGGAGATGAGCAAGCAGTGGAGTGAAAGGGTTTGTGAAGAATTCTACAGGCAAGGTGAACTTGAACAGAAATTTGAACTGGAAATCAGTCCTCTTTGTAATCAACAGAAAGATTCAATCCCTAGTATACAAATTGGTTTCATGACCTACATCGTGGAGCCGCTGTTCCGGGAATGGGCCCACTTCACCGGAAGCAACCCTCTGTCTGAGAACATGCTAAGCCACCTCGCACACAACAAAGCCCAGTGGAAGAGCCTACTGCCCAAGCAGCACAGAAGCAGGGGCGGTAGTGGCAGCTGCCCCGACCACGACCCTGCAGGCCACAAGACTGAGAACGAGGAGCAAGAAGGCGACACCGCGTAG</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">>mouse</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;"></ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">ATGTCTTGTTTAATGGTTGAGAGGTGTGGCGAAGTCTTGTTTGAGAGCCCTGAACAGAGTGTCAAATGTGTTTGCATGCTAGGAGATGTACGACTAAGGGGTCAGACGGGGGTTCCTGCCGAACGCCGTGGCTCCTACCCATTCATTGACTTCCGTCTACTTAACAATACAACACACTCAGGGGAAATTGGCACCAAGAAAAAGGTGAAACGACTGTTAAGTTTCCAAAGATACTTCCATGCATCTAGGCTTCTCCGGGGGATTATACCGCAGGCCCCTCTCCACCTGCTGGATGAAGACTACCTTGGACAAGCAAGGCACATGCTCTCCAAAGTTGGAACGTGGGACTTTGACATTTTCTTGTTTGATCGCTTGACAAATGGGAACAGTCTGGTAACTCTGTTGTGTCACCTCTTCAACTCCCATGGGCTCATCCACCATTTCAAGCTCGATATGGTGACCTTGCACAGGTTTCTGGTTATGGTTCAGGAAGATTACCACGGTCACAACCCATACCACAATGCTGTTCACGCAGCCGACGTCACCCAGGCCATGCACTGTTACCTGAAGGAGCCAAAGTTGGCAAGCTTCCTCACACCTCTGGACATCATGCTTGGACTACTGGCTGCAGCAGCTCATGACGTGGACCACCCAGGGGTCAACCAGCCATTTTTGATCAAAACTAACCACCATCTTGCCAACCTGTATCAGAATATGTCTGTACTGGAGAATCACCACTGGCGATCTACAATTGGCATGCTTCGAGAATCACGGCTCCTGGCTCACTTGCCAAAGGAAATGACACAGGATATCGAACAGCAGCTGGGCTCCCTCATCTTGGCCACGGATATCAACAGACAGAATGAGTTTCTGACCCGCTTAAAAGCTCACCTCCACAATAAAGATTTGAGACTGGAGAATGTACAGGACAGACACTTTATGCTTCAGATCGCCTTGAAGTGTGCTGACATTTGCAATCCTTGTCGTATCTGGGAGATGAGCAAGCAGTGGAGTGAAAGGGTCTGTGAGGAATTCTACAGACAAGGTGACCTTGAACAGAAGTTTGAACTGGAAATCAGTCCTCTTTGTAATCAACAGAAAGATTCAATCCCTAGCATACAAATTGGTTTCATGACTTACATCGTGGAGCCGCTGTTCCGGGAGTGGGCCCGGTTTACTGGGAACAGCACCCTGTCGGAGAACATGCTAAGCCATCTCGCGCACAACAAAGCCCAGTGGAAGAGCCTGCTGTCCAATCAGCACAGACGCAGGGGCA---GCGG------------CCAGGACCTGGCGGGCCCCGCACCTGAGACCCTGGAGCA-GAAGGTGCCACGCCCTAA</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">>rat</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;"></ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">---------------------AGGTGTGGCGAAGTCTTGTTTGAGAATCCTGAGCAGAATGTCAAATGTGTTTGCATGCTAG------------------------------------------------------------------------------------ATACAACACACTCAGGGGAAATTGGCAGCAAGAAAAAGGTGAGGAGACTGTTAAGTTTCCAAAGGCACTTCCATGAATCTAGGCTGCTCCGGGGGATGACACCGCAGGCCCCCCTCCACCTGCTGGACGAAGACTACCTTGGACAAGCAAGGCATATGCTCTCCAAAGTTGGAATGTGGGACTTTGACATTTTCTTGTTTGATCGCTTGACAAATGGGAACAGTCTGGTAACTCTGTTGTGTCACCTCTTCAACTCCCATGGACTCATCCACCATTTCAAGCTTGACATGGTGACCTTACACAGGTTTTTGGTTATGGTTCAGGAAGATTACCACGGCCACAACCCGTACCACAATGCTGTTCATGCAGCTGACGTCACCCAGGCCATGCACTGTTACTTGAAGGAGCCAAAGTTGGCGAGCTTCCTCACACCTCTGGACATCATGCTTGGACTATTGGCTGCAGCAGCTCATGACGTGGACCACCCAGGGGTGAACCAGCCATTTTTGATCAAAACTAACCACCACCTTGCCAACTTGTATCAGAACATGTCCGTACTGGAGAATCACCACTGGCGGTCTACAATCGGCATGCTTCGGGAATCAAGGCTCCTTGCTCATTTGCCAAAGGAAATGACACAGGATATCGAACAGCAGCTGGGCTCCCTGATCTTGGCCACGGACATCAACAGACAGAATGAGTTCCTGACCCGCTTAAAAGCTCACCTCCACAATAAGGATTTGAGACTGGAAAATATACAGGACAGACACTTTATGCTTCAGATCGCCTTGAAGTGCGCTGACATTTGCAATCCTTGTCGAATCTGGGAGATGAGCAAGCAGTGGAGTGAAAGAGTCTGCGAAGAATTCTACAGGCAAGGTGACCTTGAACAGAAGTTTGAACTGGAAATCAGTCCTCTTTGTAATCAACAGAAAGATTCAATCCCTAGCATACAAATTGGTTTCATGACTTACATCGTGGAGCCACTGTTCCGGGAGTGGGCCCGGTTCACTGGGAACAGCACCCTGTCGGAGAGCATGCTAAACCATCTCGCGCACAACAAAGCCCAGTGGAAGAGCCTGCTGTCCAATCAGCACAGACGCAGGGGCA---GCGG------------CCAGGACCCAGCGGGCACGGCGCCTGAGACCCTGGAGCA-GAAGGCGCCACGCCCTAA</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">>dog</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;"></ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">ATGTCTTGTTTAATGGTTGAGAGGTGTGGCGAAATCTTGTTTGAAAACCCTGATCAGAATGTCAAATGTGTTTGCATGCTAGGAGATGTACGACTAAAGGGTCAGACGGGGGTTCCTGCTGAACGCCGTGGCTCCTACCCATTCATTGACTTCCGCCTACTTAACAATACAACACACTCAGGGGAAATTGGCACTAAAAAAAAGGTGAAAAGACTGTTAAGCTTTCAAAGATACTTCCATGCATCGAGGTTGCTTCGTGGAATTATACCACAGGCCCCTCTCCACCTGCTGGATGAAGACTACCTTGGACAAGCAAGGCATATGCTCTCCAAAGTGGGAATGTGGGATTTTGACATTTTCTTATTTGATCGCTTGACAAATGGAAACAGCCTGGTAACACTGTTGTGCCACCTCTTCAACACTCATGGACTCATTCACCATTTCAAGTTAGATATGGTCACCTTGCACAGGTTTTTGGTCATGGTTCAAGAAGATTACCACAGCCAAAACCCATACCACAATGCTGTCCATGCAGCCGATGTCACCCAGGCCATACACTGCTACCTGAAGGAGCCAAAGCTCGCCAGCTTCCTCACACCTCTGGACATCATGCTTGGACTGCTGGCTGCAGCAGCACATGATGTTGACCATCCAGGAGTGAACCAGCCATTTTTGATCAAAACTAACCACCATCTCGCCAACCTATACCAGAATATGTCTGTGCTGGAGAATCACCACTGGCGATCTACAATCGGCATGCTTCGAGAATCAAGGCTTCTTGCTCACTTGCCAAAGGAAATGACACAGGATATTGAACAGCAGCTGGGCTCCTTGATCTTGGCAACAGACATCAACAGGCAGAATGAATTTTTGACCAGATTGAAAACTCACCTCCACAATAAAGATTTAAGACTGGAGGATGTACACGACAGGCACTTTATGCTTCAGATTGCCTTGAAGTGCGCTGACATTTGCAATCCTTGTAGAATTTGGGAGATGAGCAAGCAGTGGAGTGAAAGGGTCTGTGAAGAATTCTACAGGCAAGGGGACCTTGAACAGAAATTTGAACTGGAAATCAGTCCACTTTGTAATCAACAGAAAGATTCAATCCCTAGCATACAAATTGGTTTCATGACCTACATCGTGGAGCCACTTTTCCGGGAGTGGGCCCGTTTCACTGGGAACAGCGCCCTGTCTGAGAACATGCTACGCCATCTGTCACACAACAAAGCCCAGTGGAAGAGCCTGTTGCCCAAGCAGCAGAGAAGCAGCAGCGGAGGTGGTGGCGGCGGCGGCGAGGACCAGGCAGGCCACGGGCCGGAGAACGAGGAGCACATAGGCGACGCCCCGTAG</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">>elephant</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;"></ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">ATGTCTTGTTTAATGGTTGAGAGGTGTGGCGAAATCTTGTTTGAGAACCCTGATCAGAATGCCAAATGTGTTTGCATGCTAG------------------------------------------------------------------------------------ATACAACACACTCAGGGGAAATTGGCACCAAGAAAAAGGTGAAAAGACTGTTAAGCTTTCAAAGATACTTCCATGCATCGAGGCTGCTTCGTGGAATTATACCACAAGCCCCTCTCCACCTGCTGGATGAAGACTACCTGGGACAAGCAAGGCATATGCTGTCCAAAGTGGGAATGTGGGATTTTGACATTTTCTTGTTTGATCGCTTGACAAATG------------------------------------------------------------------------------------------------TCATGGTTCAGGAAGACTACCACAGCCAAAACCCGTATCATAATGCTGTCCACGCAGCCGATGTCACCCAGGCCATGCACTGCTACCTGAAAGAGCCAAAGCTCGCCAGTTTCCTCACGCCTCTGGACATCATGCTTGGACTGCTGGCTGCAGC-------------------------------------------------------------------------------AATATGTCTGTGCTGGAGAATCACCACTGGAGATCTACAATTGGCATGCTTCGAGAATCAAGGCTTCTGGCTCACTTGCCAAAGGAAATGACACAGGATATTGAACAGCAGCTGGGCTCCTTGATCTTAGCAACAGACATCAACAGGCAGAATGAATTTTTGACCAGATTGAAAGCTCACCTCCACAATAAAGATTTAAGACTGGAAGATACACACGACAGGCACTTTATGCTTCAGATTGCCTTGAAGTGTGCTGACATCTGCAACCCTTGTAGGATCTGGGAGATGAGCAAGCAATGGAGCGAAAGGGTGTGTGAAGAATTCTACAGGCAAGGTGACCTCGAGCAGAAATTTGAACTGGAAATCAGTCCTCTTTGTAATCAACAGAAAGACTCAATCCCTAGTATACAAATTGGTTTCATGACCTACATCGTGGAGCCACTCTTCCGGGAATGGGCCCGTTTCACAGGAAACAGCCCACTGTCTGAGAACATGCTGAGCCATCTGGCGCACAACAAGGCCCAGTGGAAGAGCCTGTTGCACAAGCAGCCCAGGAG------CAGCAGCGGCAGCAG------CCCGGAGCACGGAGGCCCGGGAACCGAGAAGGAGGCACAGGATGCCGATGGCCCATAG</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">>opossum</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;"></ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">ATGTCTTGTTTAATGGTTGAGAGGTGTGGAGAAATCTCGTTTGATAACCCTGATCAGAATGCCAAATGTGTTTGCATGCTAGGAGATGTACGAGTAAGAGGTCAGACAGGGGTTCCTGCAGAACGCCGTGGCTCCTATCCATTCATTGATTTCCGCCTTCTTAACAACACAGCACACTCAGGGGAAATTGGTACCAAGAAGAAAGTAAAAAGACTACTGAGCTTTCAAAGATACTTCCATGTATCCCGGCTACACCGAGGAGCTATACCTCAAGCCCCCCTGCATTTCCTGGATGAAGACTACCTGGGCCAGGCAAGGCATATGCTCTCCAAAGTGGGAATGTGGGATTTTGACATCTTCTTATTTGATCGCTTGACAAATGGAAACACTCTGGTCCCATTGCTGTGCCACCTTTTCAACATCCATGGGCTTATTCATCATTTTCAATTAGACATGGTGACCTTACACAGGTTTTTAGTTATGGTTCAAGAAGATTACCATAGCCAAAATCCTTATCATAATGCTGTCCACGCAGCTGACGTCACCCAGGCCATGAACTGCTTTCTAAAGGAGCCTAAGCTCAGTAGCTTCCTCACACCACTGGACATCATGCTTGGTCTTCTGTCAGCTGTAACCCATGATTTAGACCACCCAGGGGTGAACCAACTTTTTTTGATCAAGACTAATCACCATCTTTGCAGCTTATATCAGAATATTTCTGTACTAGAGAATCACCACTGGCGATCTGCAGTTTGCTTGCTCCGAGAGTCAAGGCTCTTTGCACATTTGCCAAAGGAAATGACGCAGGATATTGAACAACGACTGGGTTCCCTCATTTTGGCCACGGACATCACCCGGCAGAAAGAATTCCTGACCCGCTTAGAAAATCATCTCAAGAATCAAGATTTGAGATTGGAAGATGCTCAGAACCGACATTTTATTCTTCAGATTGCGCTGAAGTGTGCTGACATTTGCAATCCTTGTAGGATCTGGGAGGTGAGCAAACAGTGGAGTGAAAGGGTCTGTGAAGAGTTCTACAGGCAAGGTGACCTCGAGCAGAAATTCAAACTGGAAATAAGTCCTCTTTGTAATCAACAGGAGGATTCTATTCCTAGTATACAAATTGGCTTCATGACCCATATTGCTGAGCCACTCTTCAAGAAATGGTACCATTTTACAGAA---AGTCCTCTGGGTGAAAATATGTTAAGCCATCTCACAACCAACAAAGCCAAGTGGAAAAGCATACAACATACACAACACAGCAGTGGTGGCAGTAGTGGCAGTAATAGCAACAATGACCATGCAGGCCAAGGAACTGAAAACGAGGAGCATGAAGGAGACTCCCCATAA</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">>platypus</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;"></ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">ATGTCTTGTTTAATGGTTGAGAGGTGTGGAGAAATCTTGTTTGATAGCCCTGATCAGAATGCCAAATGTGTTCGCATGCTAGGAGATGTACGAGTGAGAGGTCAGACGGGGGTTCCTGCTGAACGCCGTGGCTCCTACCCGTTCATTGACTTCCGCCTGCTAAACAATACACCACACTCAGGGGAAATTGGCACCAAAAAGAAGGTGAAGAGACTGTTGAGCTTTCAAAGATATTTCCATGCATCCAGGCTGCTGCGAGGGTTTGTCCCCCAGGCCCCTCTGCACTTGCTGGATGAAGATTACCTTGGACAAGCAAGGCATATGCTCTCCAAAGTGGGAATGTGGGATTTTGACATTTTCTTATTTGATCGCTTGACAAATGGAAACAGCCTGGTAACATTGCTGTGCCATCTTTTCAACATACATGGGCTTATTCACCATTTCCAGTTAGATATGGTTACGTTACATAGGTTTTTAGTTATGGTTCAAGAAGATTACCATAACCACAATCCATATCACAATGCTGTCCATGCCGCCGACGTGACTCAGGCGATGCACTGCTATCTGAAGGAGCCCAAGCTCGCCAGTTTCCTCACACCACTGGACATTATGCTCGGCCTGCTGGCTGCTGCAGCCCACGATGTAGACCACCCTGGGGTCAACCAGCCATTTTTGATCAAAACCAACCACCATCTTGCCAGTTTATATCAGAATGTGTCCGTGCTGGAGAATCACCACTGGCGTTCTACGATCGGCATGCTCCGAGAATCGAGGCTCCTTGCCCATCTGCCTCCTGAAATGACGCAGGACATTGAACAGCAGCTGGGTTCCCTGATCCTGGCTACAGACATCAATAGGCAGAATGAATTTCTGACCCGCTTAAAAGCGCATCTGGACAACAAGGATTTGAAACTGGAGGATGCTCAAGACAGACATTTTATGCTTCAGATCGCACTCAAGTGTGCTGACATTTGCAATCCTTGTAGAATCTGGGAGATGAGCAAGCAGTGGAGTGAAAGGGTCTGTGAGGAATTCTACCGGCAAGGTGACCTTGAACGGAAATTTGAATTGGAGATAAGTCCTCTTTGTAATCAGCAGAAGGACACAATACCCAGTATACAAATAG--------ACGTACATTGTCGAGCCGCTCTTCGAGGAATGGGCCCAGTTTACCGGAGACACTCCCCTGTCTGAAAACATGCTGAGCCACCTCACGCGCAACAAGGCCAAGTGGAGGGGTCTGCTCCACAAACAGCACAgcggcggcggcgggggtggcggcggcggcagcggTGACCACTCAAGCCCAGTGACTGAAAATGAAGAGCAGGAAGGGGAGACCCCTTAG</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">>chicken</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;"></ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">ATGTCTTGTTTAATGGTTGAGAGGTGCGGAGAAATCTCATTTGATAGTCCTGACCAGAATGCCAAATGTGTTCGCATGCTAG------------------------------------------------------------------------------------ATACAACACTCTCAGGGGAAATTGGCACCAAGAAAAAGGTGAAAAGACTGTTAAGTTTTCAGAGGTATTTCCATGCATCCCGGCTACTGCGTGGAATCATACCACAGGCCTCTCTGTACCTGCTGGATGAGGACTACCTTGGACAAGCACGGCATATGCTATCCAAAGTGGGAACATGGGATTTTGACATTTTCTTGTTCGACCGCTTGACAAATGGAAACAGTCTCGTAACACTGCTCTGTCACCTCTTCAACGTGCATGGACTTATTCATCATTTCCAGCTAGATATGGTTACATTACATAGGTTTTTAGTTATGGTTCAAGAAGATTACCACAGCCAGAACCCTTACCACAATGCTGTCCACGCTGCTGACGTCACACAAGCTATGCACTGCTATCTAAGGGAACCCAAGCTTGCCAACTTCCTCACCCCATCGGACATCATGCTTGGACTGCTGGCTGCTGCAGCTCACGATGTGGATCATCCAGGGGTCAACCAGCCATTTTTAATCAAAACAAAACACCACCTTGCCAGCCTGTACCAGAATGTTTCAGTGCTAGAGAATCATCACTGGAGATCTACGATAGGCATGCTTAGAGAATCACGGCTCCTTGCTCATCTGCCCAAGGAGGTGACACAAGACATCGAACAGCAGTTAGGCTCCCTGATCTTGGCAACAGACATCAACAGACAGAATGAGTTCTTGATTCGTCTGAAGTCTCACCTTGACAATCAGGATTTGAGACTGGAGGATACACGAGACAGACATTTTATGCTCCAGATTGCACTCAAGTGTGCTGACATCTGCAACCCCTGCCGGCTGTGGGAGCTGAGCAAGCAGTGGAGCGAGAGGGTCTGTGAGGAGTTCTACCGCCAAGGTGACCTGGAACAAAAATTTGAACTGGAAATAAGCCCACTTTGTAATCAGCAGAAGGATACAATACCAAGCATTCAGATTGGGTTCATGACGTACATTGTAGAGCCACTCTTTGAGAAGTGGGCCCAGTTTACAGGCGATACCCCCTTATCTGAAAACATGCTAAACCATCTCAGGAGGAACAAGGCGAAGTGGAGGAGTTTGCTCCATAAGCAACACAGCAG------------------TAGTAGGAGCAATGACCACTCAGGTCAAGTGACTGGCAGCCAGGAACATGAAGAAGAAACTCCTTAG</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">>lizard</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;"></ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">ATGTCTTGTTTAATGGTTGAGAGGTGTGGAGAAATCTCATTTGATAGCCCAGAGCAGAATGCCAAATGCTTTCGCATGCTAGGAGATGCACGGCTGAGAGGTCAGACTGGGGTTCTTTCTGAGCGACGTGGTTCCTACCCGTTTATAGACTTCCGTCTTCTCAACAATACCATTTACTCAGGGGAAATTGGAACAAAGAAAAAGCTAAAAAGACTGTTAAGTTTTCAGAGATATTTCCATGCATCCAGGCTGCTGCGTGGAATCGTACCACAAACCTCACTGTATTTGCTGGATGAAGACTACCTTGGTCAAGCAAGACACATGTTGTCTAAAGTGGGATTGTGGGATTTTGACATTTTCCTATTTGACCGCTTGACAAATGGAAACAGCCTGGTAACTTTACTGTGCCACCTCTTCAATGTACATGGGCTTATCCACCATTTCGAATTAGACATGGTTACGTTACACAGGTTCTTAGTTATGGTGCAAGAAGATTATCATAGCCAAAATCCATACCACAATGCTGTCCACGCTGCTGATGTTACCCAAGCCATGCACTGCTACCTTAAGGAGCCCAAGCTAGCTAACTTCCTCACTCCTCTGGACATTATGCTTGGACTACTGGCTGCTGCAGCTCATGATGTAGATCATCCAGGAGTCAACCAGCCATTTTTGATAAACACCAAACACTACCTTGCCAATTTATACCAGAATGTCTCCGTACTAGAAAACCATCACTGGAGGTCTACAATAGGCATGCTCCGGGAATCAAGGCTGCTTGCACATTTGCCAAAGGAAGAGAGGCAAGATATTGAACAACAGCTGGGCTCCCTGATCTTGGCGACAGACATCAACAGGCAGAATGAATTTCTGACCCGGTTGAAAACTCATCTCAAAAATCAGGATTTGAAATTAGAGGATGCTCCAGACAGGCACTTTATGCTTCAGATTGCGTTGAAGTGTGCAGACATCTGCAATCCTTGCCGGCTTTGGGAAATGAGTAAACAGTGGGGTGAACGGGTTTGTGAGGAATTCTACAGGCAAGGTGACCTGGAGCAGAAATTCGACATGGAAATAAGCCCTCTTTGTAATCAGCAGAAAGATACAATACCTAGTATACAAATTGGCTTCATGACCTACATTGTGGAACCACTCTTTGAAGAATGGGCCAACTTTACTGGGAACACTCCCTTATCTGAAAACATGTTAAACCATCTGAGAAGGAACAAGACCAAGTGGCGGAATTTGCTTCATAAGCAACAtagcag------------------cagcagaagcactgACCACTCAGTTCAAAAGACTGAACATGAAGAACATGAAGGAGGAACCCTGTAG</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;"></pre></ins></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>=Evolúcia, cvičenia pre informatikov=</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>=Evolúcia, cvičenia pre informatikov=</div></td></tr>
</table>
Brona
http://compbio.fmph.uniba.sk/vyuka/mbi/index.php?title=MBI_2009/2010&diff=207&oldid=prev
Brona: /* Evolúcia, cvičenia pre informatikov */
2010-11-07T17:41:19Z
<p><span dir="auto"><span class="autocomment">Evolúcia, cvičenia pre informatikov</span></span></p>
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<td colspan='2' style="background-color: white; color:black; text-align: center;">← Staršia verzia</td>
<td colspan='2' style="background-color: white; color:black; text-align: center;">Verzia zo dňa a času 17:41, 7. november 2010</td>
</tr><tr><td colspan="2" class="diff-lineno">Riadok 482:</td>
<td colspan="2" class="diff-lineno">Riadok 482:</td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>=Evolúcia, cvičenia pre informatikov=</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>=Evolúcia, cvičenia pre informatikov=</div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><del class="diffchange diffchange-inline">==Cvicenie informatici==</del></div></td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>==RT-PCR==</div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><del class="diffchange diffchange-inline">=</del>==RT-PCR<del class="diffchange diffchange-inline">=</del>==</div></td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* Pozri slidy [http://compbio.fmph.uniba.sk/vyuka/mbi/poznamky/ci06.pdf]</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* Pozri slidy [http://compbio.fmph.uniba.sk/vyuka/mbi/poznamky/ci06.pdf]</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'>−</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><del class="diffchange diffchange-inline">=</del>==Substitucne modely - odvodenie<del class="diffchange diffchange-inline">=</del>==</div></td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>==Substitucne modely - odvodenie==</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* Nech <math>P(b|a,t)</math> je pravdepodobnost, ze ak sme zacneme s bazou a, tak po case t budeme mat bazu b.</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* Nech <math>P(b|a,t)</math> je pravdepodobnost, ze ak sme zacneme s bazou a, tak po case t budeme mat bazu b.</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* Pre dane t mozeme take pravdepodobnosti usporiadat do matice 4x4 (ak studujeme DNA), kde <math>S(t)_{a,b}=P(b|a,t)</math></div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* Pre dane t mozeme take pravdepodobnosti usporiadat do matice 4x4 (ak studujeme DNA), kde <math>S(t)_{a,b}=P(b|a,t)</math></div></td></tr>
<tr><td colspan="2" class="diff-lineno">Riadok 558:</td>
<td colspan="2" class="diff-lineno">Riadok 557:</td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* Vo vseobecnosti pre rate matrix <math>R</math> dostavame <math>S(t)=e^{Rt}</math>. Ak R diagonalizujeme (urcite sa da pre symetricke R) <math>R = U D U^{-1}</math>, kde D je diagonalna matica (na jej diagonale budu vlastne hodnoty R), tak <math>e^{Rt} = U e^{Dt} U^{-1}</math>, t.j. exponencialnu funkciu uplatnime iba na prvky na uhlopriecke matice D.</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* Vo vseobecnosti pre rate matrix <math>R</math> dostavame <math>S(t)=e^{Rt}</math>. Ak R diagonalizujeme (urcite sa da pre symetricke R) <math>R = U D U^{-1}</math>, kde D je diagonalna matica (na jej diagonale budu vlastne hodnoty R), tak <math>e^{Rt} = U e^{Dt} U^{-1}</math>, t.j. exponencialnu funkciu uplatnime iba na prvky na uhlopriecke matice D.</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'>−</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><del class="diffchange diffchange-inline">=</del>==Felsensteinov algoritmus 1981<del class="diffchange diffchange-inline">=</del>==</div></td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>==Felsensteinov algoritmus 1981==</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* Mame dany strom T s dlzkami hran a bazy v listoch (jeden stlpec zarovnania) a maticu rychlosti R. Spocitajme pravdepodobnost, ze z modelu dostaneme prave tuto kombinaciu baz v listoch.</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* Mame dany strom T s dlzkami hran a bazy v listoch (jeden stlpec zarovnania) a maticu rychlosti R. Spocitajme pravdepodobnost, ze z modelu dostaneme prave tuto kombinaciu baz v listoch.</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* Nech X_v je premenna reprezentujuca bazu vo vrchole v a nech x_v je konkretna baza v liste v. Nech listy su 1..n a vnut. vrcholy n+1..2n-1. Nech dlzka hrany z v do rodica je t_v. Nech P(a|b,t) je pravdepodobnost, ze b sa zmeni na a za cas t (z matice R). Nech q_a je pravdepodobnost bazy a v koreni (ekvilibrium matice R)</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* Nech X_v je premenna reprezentujuca bazu vo vrchole v a nech x_v je konkretna baza v liste v. Nech listy su 1..n a vnut. vrcholy n+1..2n-1. Nech dlzka hrany z v do rodica je t_v. Nech P(a|b,t) je pravdepodobnost, ze b sa zmeni na a za cas t (z matice R). Nech q_a je pravdepodobnost bazy a v koreni (ekvilibrium matice R)</div></td></tr>
</table>
Brona
http://compbio.fmph.uniba.sk/vyuka/mbi/index.php?title=MBI_2009/2010&diff=150&oldid=prev
Brona: /* Zarovnanie */
2010-10-07T06:43:38Z
<p><span dir="auto"><span class="autocomment">Zarovnanie</span></span></p>
<table class='diff diff-contentalign-left'>
<col class='diff-marker' />
<col class='diff-content' />
<col class='diff-marker' />
<col class='diff-content' />
<tr style='vertical-align: top;'>
<td colspan='2' style="background-color: white; color:black; text-align: center;">← Staršia verzia</td>
<td colspan='2' style="background-color: white; color:black; text-align: center;">Verzia zo dňa a času 06:43, 7. október 2010</td>
</tr><tr><td colspan="2" class="diff-lineno">Riadok 323:</td>
<td colspan="2" class="diff-lineno">Riadok 323:</td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* Translated search</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* Translated search</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'>−</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>=Jadrá s medzerami, cvičenia pre informatikov</div></td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>=Jadrá s medzerami, cvičenia pre informatikov<ins class="diffchange diffchange-inline">=</ins></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* Cvicenia pre informatikov z jadier s medzerami (spaced seeds)</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* Cvicenia pre informatikov z jadier s medzerami (spaced seeds)</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* Ospravedlnujem sa za chybajucu diakritiku  </div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* Ospravedlnujem sa za chybajucu diakritiku  </div></td></tr>
</table>
Brona
http://compbio.fmph.uniba.sk/vyuka/mbi/index.php?title=MBI_2009/2010&diff=139&oldid=prev
Brona: /* Typy projektov */
2010-10-03T18:54:44Z
<p><span dir="auto"><span class="autocomment">Typy projektov</span></span></p>
<table class='diff diff-contentalign-left'>
<col class='diff-marker' />
<col class='diff-content' />
<col class='diff-marker' />
<col class='diff-content' />
<tr style='vertical-align: top;'>
<td colspan='2' style="background-color: white; color:black; text-align: center;">← Staršia verzia</td>
<td colspan='2' style="background-color: white; color:black; text-align: center;">Verzia zo dňa a času 18:54, 3. október 2010</td>
</tr><tr><td colspan="2" class="diff-lineno">Riadok 950:</td>
<td colspan="2" class="diff-lineno">Riadok 950:</td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>Toto su typicke druhy projektov, mozete sa vsak pokusit aj o projekt ineho typu, alebo skombinovat niekolko typov.</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>Toto su typicke druhy projektov, mozete sa vsak pokusit aj o projekt ineho typu, alebo skombinovat niekolko typov.</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* '''Prehladove''': prestudujte niekolko suvisiach clankov (cca 3 ale moze byt aj viac) a spiste prehlad ich vysledkov.  </div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* '''Prehladove''': prestudujte niekolko suvisiach clankov (cca 3 ale moze byt aj viac) a spiste prehlad ich vysledkov.  </div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>* '''Aplikacne''': pouzite existujuce programy na nove data (data mozu byt nahodne generovane, stiahnute z databaz na internete, alebo z vasho vlastneho vyskumu). Mali by ste rozumiet, aky problem presne pouzite programy riesia a aky je vyznam ich parametrov. Ak pouzivate len jeden program, skuste aspon menit nastavenia parametrov <del class="diffchange diffchange-inline">z </del>vsimat si ich vplyv na vysledok. Druha moznost je porovnat vysledky roznych programov alebo urobit zlozitejsiu analyzu pomocou viacerych programov, ktore na seba nadvazuju. V kazdom pripade by sme mali nejako (aspon nepriamo) vyhodnotit, ci program dava rozumne vysledky.  </div></td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>* '''Aplikacne''': pouzite existujuce programy na nove data (data mozu byt nahodne generovane, stiahnute z databaz na internete, alebo z vasho vlastneho vyskumu). Mali by ste rozumiet, aky problem presne pouzite programy riesia a aky je vyznam ich parametrov. Ak pouzivate len jeden program, skuste aspon menit nastavenia parametrov <ins class="diffchange diffchange-inline">a </ins>vsimat si ich vplyv na vysledok. Druha moznost je porovnat vysledky roznych programov alebo urobit zlozitejsiu analyzu pomocou viacerych programov, ktore na seba nadvazuju. V kazdom pripade by sme mali nejako (aspon nepriamo) vyhodnotit, ci program dava rozumne vysledky.  </div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* '''Implementacne''': implementujte zlozitejsi algoritmus z nejakeho clanku (pripadne aj z prednasky) a otestujte ho na datach. Okrem testov na odstranenie chyb v kode, ktore by mali byt samozrejmostou, treba spravit aj testy, ktore vyhodnocuju rychlost algoritmu alebo presnost jeho vysledkov, najlepsie v porovnani s inymi algoritmami/implementaciami alebo v zavislosti od nejakych parametrov.  </div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* '''Implementacne''': implementujte zlozitejsi algoritmus z nejakeho clanku (pripadne aj z prednasky) a otestujte ho na datach. Okrem testov na odstranenie chyb v kode, ktore by mali byt samozrejmostou, treba spravit aj testy, ktore vyhodnocuju rychlost algoritmu alebo presnost jeho vysledkov, najlepsie v porovnani s inymi algoritmami/implementaciami alebo v zavislosti od nejakych parametrov.  </div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* '''Vymyslacie''': vymyslite novy algoritmus alebo pravdepodobnostny model, analyzujte existujuci algoritmus a podobne. Pripadne potom mozete svoje napady skusit aj implementovat a testovat.</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>* '''Vymyslacie''': vymyslite novy algoritmus alebo pravdepodobnostny model, analyzujte existujuci algoritmus a podobne. Pripadne potom mozete svoje napady skusit aj implementovat a testovat.</div></td></tr>
</table>
Brona
http://compbio.fmph.uniba.sk/vyuka/mbi/index.php?title=MBI_2009/2010&diff=138&oldid=prev
Brona: Created page with ''''Metódy v bioinformatike, školský rok 2009/2010''' Táto wiki obsahuje rôzne poznámky k predmetu [http://compbio.fmph.uniba.sk/vyuka/mbi/ Metódy v bioinformatike] (2-AIN…'
2010-10-03T18:53:22Z
<p>Created page with ''''Metódy v bioinformatike, školský rok 2009/2010''' Táto wiki obsahuje rôzne poznámky k predmetu [http://compbio.fmph.uniba.sk/vyuka/mbi/ Metódy v bioinformatike] (2-AIN…'</p>
<a href="http://compbio.fmph.uniba.sk/vyuka/mbi/index.php?title=MBI_2009/2010&diff=138">Zobraziť rozdiely</a>
Brona