1-BIN-301, 2-AIN-501 Methods in Bioinformatics, 2021/22

Introduction · Rules · Tasks and dates · Materials · Moodle · Discussion
Cvičenia vo štvrtok o 14:00 sú určené pre študentov BIN, INF, mINF, mAIN, DAV. Cvičenia vo štvrtok o 17:20 sú pre študentov z PriFUK a z fyzikálnych odborov. Obidvoje cvičenia sa budú konať už v prvom týždni semestra.


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| style="background:#f0f0f0" | '''Dátum zverejnenia'''
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| style="background:#f0f0f0" | '''When published'''
| style="background:#f0f0f0" | '''Termín odovzdania'''  
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| style="background:#f0f0f0" | '''Deadline for submitting'''  
| style="background:#f0f0f0" | '''Zadanie'''
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| style="background:#f0f0f0" | '''Questions'''
{{DU | Domáca úloha 1 | 17.10.2019 | 14.11.2019 do 14:00 (inf) resp. 15:40 (bio)| inf: {{pdf|a1i}}, bio: {{pdf|a1b}} }}
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{{DU | Quizes (Slovak only) | Each Thursday 19:00  | Next Wednesday 22:00 | }}
{{DUviac}} Sekvenovanie, zarovnávanie<br>Súbory pre biológov: [http://compbio.fmph.uniba.sk/vyuka/mbi-data/du1/du1-b.xls Excelová tabuľka]
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{{DUviac}} [https://moodle.uniba.sk/course/view.php?id=2160 Quizzes in Moodle]
 
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{{DU | Domáca úloha 2 | 21.11.2019 | 5.12.2019 do 14:00 (inf) resp. 15:40 (bio) | <!-- inf: {{pdf|a2i}}, bio: {{pdf|a2b}} --> }}
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{{DU | Homework 1 | Oct. 14, 2021 | November 9, 2021 22:00| inf: {{pdf|a1i-en}}, bio: {{pdf|a1b}} }}
{{DUviac}} HMM, evolúcia, komparatívna genomika<!-- <br>Súbory pre informatikov: [http://compbio.fmph.uniba.sk/vyuka/mbi-data/a2-i.zip zip]<br>Informatici odovzdávajú kód v systéme [https://moodle.uniba.sk/moodle/inf11/mod/assign/view.php?id=24498 Moodle] -->
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{{DUviac}} Sequencing, alignment<br>Files for biologists: [http://compbio.fmph.uniba.sk/vyuka/mbi-data/du1/du1-b.xls Excel table]<br>Moodle: [https://moodle.uniba.sk/mod/assign/view.php?id=40955 inf], [https://moodle.uniba.sk/mod/assign/view.php?id=40956 bio]
 
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{{DU | Domáca úloha 3 | 5.12.2019 | 19.12.2019 do 22:00 | <!-- {{pdf|a3}} --> }}
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{{DU | Homework 2 | Nov. 11, 2021 | Nov. 30, 2021 22:00 | inf: {{pdf|a2i-en}}, bio: {{pdf|a2b}} }}
{{DUviac}} Proteíny, RNA <!--<br>Sekvencia: [http://compbio.fmph.uniba.sk/vyuka/mbi-data/a3.fasta fasta]<br>Odovzdajte na papieri alebo cez [https://moodle.uniba.sk/moodle/inf11/mod/assign/view.php?id=24499 Moodle] -->
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{{DUviac}} Evolution, comparative genomics <br>Files for computer scientists: [http://compbio.fmph.uniba.sk/vyuka/mbi-data/a2-i.zip zip]<br>Moodle: [https://moodle.uniba.sk/mod/assign/view.php?id=40957 inf], [https://moodle.uniba.sk/mod/assign/view.php?id=40958 bio]
 
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{{DU | Výber článku na journal club | 10.10.2019 | 22.10.2019 do 22:00 | [[Články_na_journal_club|zoznam článkov a formulár]] }}
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{{DU | Homework 3 | Nov. 30, 2021 | Dec. 14, 2021 22:00 | {{pdf|a3-en}} }}
{{DUviac}} Vyplňte formulár
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{{DUviac}} Proteins, RNA<br>Sequence: [http://compbio.fmph.uniba.sk/vyuka/mbi-data/a3.fasta fasta]<br>[https://moodle.uniba.sk/mod/assign/view.php?id=40959 Moodle]
{{DU | Správa zo journal clubu | | 20.12.2019 do 22:00|  }}
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<!-- {{DUviac}} Odovzdať v [https://moodle.uniba.sk/moodle/inf11/mod/assign/view.php?id=24500 Moodli] v pdf formáte (1x za skupinu)-->
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{{DU | Journal club paper selection | Oct. 14, 2021 | Oct. 20, 2021 22:00 | [[Journal club papers|list of papers and form]] }}
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{{DUviac}} Please submit the form
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{{DU | Journal club report | | Dec. 17, 2021 22:00|  }}
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{{DUviac}} Submit in [https://moodle.uniba.sk/mod/assign/view.php?id=40960 Moodle] (1x per group)  
 
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Ak nie je v zadaní povedané inak, domáce úlohy odovzdávajte v pdf verzii do systému Moodle alebo v papierovej podobe na vyučovacej hodine, najneskôr do uvedeného termínu.
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All assignments should be submitted to Moodle as a pdf before the specified deadline.

Verzia zo dňa a času 08:52, 10. december 2021

When published Deadline for submitting Questions
Quizes (Slovak only) Each Thursday 19:00 Next Wednesday 22:00
Quizzes in Moodle
Homework 1 Oct. 14, 2021 November 9, 2021 22:00 inf: pdf, bio: pdf
Sequencing, alignment
Files for biologists: Excel table
Moodle: inf, bio
Homework 2 Nov. 11, 2021 Nov. 30, 2021 22:00 inf: pdf, bio: pdf
Evolution, comparative genomics
Files for computer scientists: zip
Moodle: inf, bio
Homework 3 Nov. 30, 2021 Dec. 14, 2021 22:00 pdf
Proteins, RNA
Sequence: fasta
Moodle
Journal club paper selection Oct. 14, 2021 Oct. 20, 2021 22:00 list of papers and form
Please submit the form
Journal club report Dec. 17, 2021 22:00
Submit in Moodle (1x per group)

All assignments should be submitted to Moodle as a pdf before the specified deadline.