1-BIN-301, 2-AIN-501 Methods in Bioinformatics, 2022/23

Introduction · Rules · Tasks and dates · Materials · Moodle · Discussion
Quizzes can be found in Moodle.
Homework assignments and journal club papers can be found in Tasks and dates.
Groups for journal club have each their own channel in MS Teams.


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| style="background:#f0f0f0" | '''Dátum zverejnenia'''
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| style="background:#f0f0f0" | '''When published'''
| style="background:#f0f0f0" | '''Termín odovzdania'''  
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| style="background:#f0f0f0" | '''Deadline for submitting'''  
| style="background:#f0f0f0" | '''Zadanie'''
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| style="background:#f0f0f0" | '''Questions'''
{{DU | Domáca úloha 1 | 19.10.2017 | 9.11.2017 do 14:00 (inf) resp. 15:40 (bio)| {{pdf|du1}} }}
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{{DU | Quizes (Slovak only) | Each Thursday 19:00  | Next Wednesday 22:00 | }}
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{{DUviac}} [https://moodle.uniba.sk/course/view.php?id=2160 Quizzes in Moodle]
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| Sekvenovanie, zarovnávanie <br>Súbory pre biológov: [http://compbio.fmph.uniba.sk/vyuka/mbi-data/du1/du1-b.xls Excelová tabuľka]  
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{{DU | Domáca úloha 2 | 16.11.2017 | 7.12.2017 do 14:00 (inf) resp. 15:40 (bio) | {{pdf|a2}} }}
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{{DU | Homework 1 | Oct. 14, 2021 | November 9, 2021 22:00| inf: {{pdf|a1i-en}}, bio: {{pdf|a1b}} }}
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{{DUviac}} Sequencing, alignment<br>Files for biologists: [http://compbio.fmph.uniba.sk/vyuka/mbi-data/du1/du1-b.xls Excel table]<br>Moodle: [https://moodle.uniba.sk/mod/assign/view.php?id=40955 inf], [https://moodle.uniba.sk/mod/assign/view.php?id=40956 bio]
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| HMM, evolúcia, komparatívna genomika<br>Súbory pre informatikov: [http://compbio.fmph.uniba.sk/vyuka/mbi-data/a2-i.zip zip]
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{{DU | Homework 2 | Nov. 11, 2021 | Nov. 30, 2021 22:00 | inf: {{pdf|a2i-en}}, bio: {{pdf|a2b}} }}
{{DU | Domáca úloha 3 | 7.12.2017 | 21.12.2017 do 22:00 | {{pdf|a3}} }}
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{{DUviac}} Evolution, comparative genomics <br>Files for computer scientists: [http://compbio.fmph.uniba.sk/vyuka/mbi-data/a2-i.zip zip]<br>Moodle: [https://moodle.uniba.sk/mod/assign/view.php?id=40957 inf], [https://moodle.uniba.sk/mod/assign/view.php?id=40958 bio]
 
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{{DU | Homework 3 | Nov. 30, 2021 | Dec. 14, 2021 22:00 | {{pdf|a3-en}} }}
| Proteíny, RNA <br>Sekvencia: [http://compbio.fmph.uniba.sk/vyuka/mbi-data/a3.fasta fasta]<br>Informatici odovzdávajú kód v systéme [https://moodle.uniba.sk/moodle/inf11/mod/assign/view.php?id%3D19715 Moodle]
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{{DUviac}} Proteins, RNA<br>Sequence: [http://compbio.fmph.uniba.sk/vyuka/mbi-data/a3.fasta fasta]<br>[https://moodle.uniba.sk/mod/assign/view.php?id=40959 Moodle]
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{{DU | Výber článku na journal club | 12.10.2017 | 24.10.2017 do 22:00 | [[Články_na_journal_club|zoznam článkov a formulár]] | Vyplňte formulár }}
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{{DU | Journal club paper selection | Oct. 14, 2021 | Oct. 20, 2021 22:00 | [[Journal club papers|list of papers and form]] }}
{{DU | Správa zo journal clubu | | 22.12.2017 do 22:00|  | Odovzdať v Moodli v pdf formáte (1x za skupinu) }}
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{{DUviac}} Please submit the form
{{DU | Návrhy projektov | | 21.12.2017 do 22:00 | | E-mailom B. Brejovej }}
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{{DU | Journal club report | | Dec. 17, 2021 22:00| }}
{{DU | Odovzdanie projektov |  | 22.1.2018 do 22:00 | | E-mailom B. Brejovej }}
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{{DUviac}} Submit in [https://moodle.uniba.sk/mod/assign/view.php?id=40960 Moodle] (1x per group)
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All assignments should be submitted to Moodle as a pdf before the specified deadline.
 
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Domáce úlohy odovzdávajte v papierovej podobe pod dvere kancelárie M163 alebo na vyučovacej hodine, najneskôr do uvedeného termínu.<br>
 
Informatici v úlohe 2 odovzdávajú zdrojový kód programu v systéme [https://moodle.uniba.sk/moodle/inf11/mod/assign/view.php?id=19715 Moodle].
 

Verzia zo dňa a času 10:03, 21. september 2022