1-BIN-301, 2-AIN-501 Methods in Bioinformatics, 2022/23

Introduction · Rules · Tasks and dates · Materials · Moodle · Discussion
Quizzes can be found in Moodle.
Homework assignments and journal club papers can be found in Tasks and dates.
Groups for journal club have each their own channel in MS Teams.


Tasks and dates: Rozdiel medzi revíziami

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| style="background:#f0f0f0" | '''Dátum zverejnenia'''
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| style="background:#f0f0f0" | '''When published'''
| style="background:#f0f0f0" | '''Termín odovzdania'''  
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| style="background:#f0f0f0" | '''Deadline for submitting'''  
| style="background:#f0f0f0" | '''Zadanie'''
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| style="background:#f0f0f0" | '''Questions'''
{{DU | Domáca úloha 1 | 17.10.2019 | 14.11.2019 do 14:00 (inf) resp. 15:40 (bio)| inf: {{pdf|a1i}}, bio: {{pdf|a1b}} }}
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{{DU | Quizes (Slovak only) | Each Thursday 19:00  | Next Wednesday 22:00 | }}
{{DUviac}} Sekvenovanie, zarovnávanie<br>Súbory pre biológov: [http://compbio.fmph.uniba.sk/vyuka/mbi-data/du1/du1-b.xls Excelová tabuľka]<br>Moodle: [https://moodle.uniba.sk/moodle/inf11/mod/assign/view.php?id=28056 informatici], [https://moodle.uniba.sk/moodle/inf11/mod/assign/view.php?id=28057 biológovia]
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{{DUviac}} [https://moodle.uniba.sk/course/view.php?id=2160 Quizzes in Moodle]
 
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{{DU | Domáca úloha 2 | 21.11.2019 | 5.12.2019 do 14:00 (inf) resp. 15:40 (bio) | inf: {{pdf|a2i}}, bio: {{pdf|a2b}} }}
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{{DU | Homework 1 | Oct. 14, 2021 | November 9, 2021 22:00| inf: {{pdf|a1i-en}}, bio: {{pdf|a1b}} }}
{{DUviac}} HMM, evolúcia, komparatívna genomika <br>Súbory pre informatikov: [http://compbio.fmph.uniba.sk/vyuka/mbi-data/a2-i.zip zip]<br>Moodle: [https://moodle.uniba.sk/moodle/inf11/mod/assign/view.php?id=27176 informatici], [https://moodle.uniba.sk/moodle/inf11/mod/assign/view.php?id=28055 biológovia]
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{{DUviac}} Sequencing, alignment<br>Files for biologists: [http://compbio.fmph.uniba.sk/vyuka/mbi-data/du1/du1-b.xls Excel table]<br>Moodle: [https://moodle.uniba.sk/mod/assign/view.php?id=40955 inf], [https://moodle.uniba.sk/mod/assign/view.php?id=40956 bio]
 
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{{DU | Domáca úloha 3 | 5.12.2019 | 19.12.2019 do 22:00 | {{pdf|a3}} }}
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{{DU | Homework 2 | Nov. 11, 2021 | Nov. 30, 2021 22:00 | inf: {{pdf|a2i-en}}, bio: {{pdf|a2b}} }}
{{DUviac}} Proteíny, RNA <br>Sekvencia: [http://compbio.fmph.uniba.sk/vyuka/mbi-data/a3.fasta fasta]<br>[https://moodle.uniba.sk/moodle/inf11/mod/assign/view.php?id=27177 Moodle]  
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{{DUviac}} Evolution, comparative genomics <br>Files for computer scientists: [http://compbio.fmph.uniba.sk/vyuka/mbi-data/a2-i.zip zip]<br>Moodle: [https://moodle.uniba.sk/mod/assign/view.php?id=40957 inf], [https://moodle.uniba.sk/mod/assign/view.php?id=40958 bio]
 
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{{DU | Výber článku na journal club | 10.10.2019 | 22.10.2019 do 22:00 | [[Články_na_journal_club|zoznam článkov a formulár]] }}
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{{DU | Homework 3 | Nov. 30, 2021 | Dec. 14, 2021 22:00 | {{pdf|a3-en}} }}
{{DUviac}} Vyplňte formulár
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{{DUviac}} Proteins, RNA<br>Sequence: [http://compbio.fmph.uniba.sk/vyuka/mbi-data/a3.fasta fasta]<br>[https://moodle.uniba.sk/mod/assign/view.php?id=40959 Moodle]
{{DU | Správa zo journal clubu | | 20.12.2019 do 22:00|  }}
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{{DUviac}} Odovzdať v [https://moodle.uniba.sk/moodle/inf11/mod/assign/view.php?id=27178 Moodli] v pdf formáte (1x za skupinu)
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{{DU | Journal club paper selection | Oct. 14, 2021 | Oct. 20, 2021 22:00 | [[Journal club papers|list of papers and form]] }}
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{{DUviac}} Please submit the form
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{{DU | Journal club report | | Dec. 17, 2021 22:00|  }}
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{{DUviac}} Submit in [https://moodle.uniba.sk/mod/assign/view.php?id=40960 Moodle] (1x per group)  
 
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Ak nie je v zadaní povedané inak, domáce úlohy odovzdávajte v pdf verzii do systému Moodle alebo v papierovej podobe na vyučovacej hodine, najneskôr do uvedeného termínu.
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All assignments should be submitted to Moodle as a pdf before the specified deadline.
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Verzia zo dňa a času 10:03, 21. september 2022