1-BIN-301, 2-AIN-501 Methods in Bioinformatics, 2022/23

Introduction · Rules · Tasks and dates · Materials · Moodle · Discussion
Quizzes can be found in Moodle.
Homework assignments and journal club papers can be found in Tasks and dates.
Exam rules, example questions and syllabus
Groups for journal club have each their own channel in MS Teams.

Tasks and dates

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When published Deadline for submitting Questions
Quizes (Slovak only) Each Thursday 19:00 Next Wednesday 22:00
Quizzes in Moodle
Homework 1 Oct. 13, 2022 Nov. 8, 2022 22:00 inf: pdf, bio: pdf
Sequencing, alignment
Files for biologists: Excel table
Moodle: inf, bio
Homework 2 Nov. 10, 2022 Nov. 29, 2022 22:00 inf: pdf, bio: pdf
Evolution, comparative genomics
Files for computer scientists: zip
Moodle: inf, bio
Homework 3 Nov. 29, 2022 Dec. 13, 2022 22:00 pdf
Proteins, RNA
Sequence: fasta
AlphaFold2 results: orf1, orf3
Journal club paper selection Oct. 13, 2022 Oct. 19, 2022 22:00 list of papers and form
Please submit the form
Journal club report Dec. 16, 2022 22:00
Submit in Moodle (1x per group)

All assignments should be submitted to Moodle as a pdf before the specified deadline.