2-AIN-506, 2-AIN-252: Seminar in Bioinformatics (2), (4)
Summer 2026
Schedule

Time and place:
Wednesday 17:20, I-23 or online in MS Teams.
 
Instructors:
doc. Mgr. Tomáš Vinař, PhD M-163,
 
 
doc. Mgr. Broňa Brejová, PhD M-163,
 
 
Seminar schedule:
Short talk schedule
 
2026-02-18
Filip Kerák

Pedro Tomaz da Silva, Alexander Karollus, Johannes Hingerl, Gihanna Sta Teresa Galindez, Nils Wagner, Xavier Hernandez-Alias, Danny Incarnato, Julien Gagneur. Nucleotide dependency analysis of genomic language models detects functional elements. Nature genetics, 2025. link

2026-02-25
Tomáš Vinař

Sergio Arredondo-Alonso, Anna K. Pontinen, Joao A. Gama, Rebecca A. Gladstone, Klaus Harms, Gerry Tonkin-Hill, Harry A. Thorpe, Gunnar S. Simonsen, Orjan Samuelsen, Pal J. Johnsen, Jukka Corander. Plasmid-driven strategies for clone success in Escherichia coli. Nat Commun, 2025. link

2026-03-04
Monika Buchalová

Karina Ilchenko, Remy A. Bonnin, Eduardo P. C. Rocha, Eugen Pfeifer. Efficient detection and typing of phage-plasmids. mBio, 2026. link

2026-03-11
Muqadas Baksh
2026-03-18
Jana Černíková

James Robertson, John H. E. Nash. MOB-suite: software tools for clustering, reconstruction and typing of plasmids from draft assemblies. Microb Genom, 2018. link

James Robertson, Kyrylo Bessonov, Justin Schonfeld, John H. E. Nash. Universal whole-sequence-based plasmid typing and its utility to prediction of host range and epidemiological surveillance. Microb Genom, 2020. link

2026-03-25
Alessia Petescia
2026-04-01
no seminar
2026-04-08
Luca Denti
2026-04-15
no seminar
2026-04-22
2026-04-29
2026-05-06
2026-05-13
2026-05-20
no seminar?