| Time and place: | ||
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| Wednesday 17:20, I-23 or online in MS Teams. | ||
| Instructors: | ||
| doc. Mgr. Tomáš Vinař, PhD | M-163, | ![]() |
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| doc. Mgr. Broňa Brejová, PhD | M-163, | ![]() |
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| Seminar schedule: | ||
| Short talk schedule | ||
| 2026-02-18 Filip Kerák | Pedro Tomaz da Silva, Alexander Karollus, Johannes Hingerl, Gihanna Sta Teresa Galindez, Nils Wagner, Xavier Hernandez-Alias, Danny Incarnato, Julien Gagneur. Nucleotide dependency analysis of genomic language models detects functional elements. Nature genetics, 2025. link |
| 2026-02-25 Tomáš Vinař | Sergio Arredondo-Alonso, Anna K. Pontinen, Joao A. Gama, Rebecca A. Gladstone, Klaus Harms, Gerry Tonkin-Hill, Harry A. Thorpe, Gunnar S. Simonsen, Orjan Samuelsen, Pal J. Johnsen, Jukka Corander. Plasmid-driven strategies for clone success in Escherichia coli. Nat Commun, 2025. link |
| 2026-03-04 Monika Buchalová | Karina Ilchenko, Remy A. Bonnin, Eduardo P. C. Rocha, Eugen Pfeifer. Efficient detection and typing of phage-plasmids. mBio, 2026. link |
| 2026-03-11 Muqadas Baksh | |
| 2026-03-18 Jana Černíková | James Robertson, John H. E. Nash. MOB-suite: software tools for clustering, reconstruction and typing of plasmids from draft assemblies. Microb Genom, 2018. link James Robertson, Kyrylo Bessonov, Justin Schonfeld, John H. E. Nash. Universal whole-sequence-based plasmid typing and its utility to prediction of host range and epidemiological surveillance. Microb Genom, 2020. link |
| 2026-03-25 Alessia Petescia | |
| 2026-04-01 no seminar | |
| 2026-04-08 Luca Denti | |
| 2026-04-15 no seminar | |
| 2026-04-22 | |
| 2026-04-29 | |
| 2026-05-06 | |
| 2026-05-13 | |
| 2026-05-20 no seminar? |