2-AIN-504: Seminár z bioinformatiky (2)
Leto 2009, archívna kópia
Rozvrh


Rozvrh | Základné informácie | Zoznam článkov | Ostatné semestre

Seminár:
Uto 17:20, I-9
 
Prednášajúci:
Mgr. Tomáš Vinař, PhD M-163, 60295207
Konzultačné hodiny: Štv 13:30-14:30
 
Oznamy:
  • 2009-02-12: Prosím, vyberte si čo najskôr článok, ktorý chcete prezentovať, a pošlite e-mail vyučujúcemu (doktorandi a študenti, čo si chcú predmet zapísať). Bližšie informácie na podstránkach "Základné informácie" a "Zoznam článkov".
  • 2009-02-12: Študenti PriFUK, ktorí si chcú predmet zapísať, si musia vyzdvihnúť na svojom študijnom oddelení príslušný formulár, vyplniť ho a doniesť ho na študijné oddelenie FMFI (miestnosť M-7, p. Parolková, každý deň 9-12 okrem štvrtka). Tento formulár môžete vyplnený doniesť aj na seminár 16.2.

 
Zoznam prezentácií:
17.2.2009
Broňa Brejová

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Alexander Stark, Pouya Kheradpour, Leopold Parts, Julius Brennecke, Emily Hodges, Gregory J. Hannon, Manolis Kellis.
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Systematic discovery and characterization of fly microRNAs using 12 Drosophila genomes.
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Genome research,
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2007.
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24.2.2009
Michal Burger

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Crystal L. Kahn, Benjamin J. Raphael.
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A Parsimony Approach to Analysis of Human Segmental Duplications. In
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Pacific Symposium on Biocomputing (PSB 2009),
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2009.
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3.3.2009
Peter Civáň

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Olivier Elemento, Noam Slonim, Saeed Tavazoie.
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A universal framework for regulatory element discovery across all genomes and data types.
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Molecular cell,
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2007.
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10.3.2009
Matúš Valach

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Umadevi Paila, Rohini Kondam, Akash Ranjan.
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Genome bias influences amino acid choices: analysis of amino acid substitution and re-compilation of substitution matrices exclusive to an AT-biased genome.
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Nucleic acids research,
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2008.
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17.3.2009
Juraj Mešťánek

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Miklos Csuros, J. Andrew Holey, Igor B. Rogozin.
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In search of lost introns.
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Bioinformatics,
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2007.
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24.3.2009
Michal Nanasi

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Yanni Sun, Jeremy Buhler.
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Designing patterns for profile HMM search.
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Bioinformatics,
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2007.
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31.3.2009
Juraj Kramara

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Jennifer L. Caswell, Swapan Mallick, Daniel J. Richter, Julie Neubauer, Christine Schirmer, Sante Gnerre, David Reich.
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Analysis of chimpanzee history based on genome sequence alignments.
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PLoS Genet,
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2008.
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7.4.2009
Kubo Kováč

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Simon Wong, Mark A. Ragan.
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MACHOS: Markov clusters of homologous subsequences.
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Bioinformatics,
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2008.
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14.4.2009
Veľká noc
21.4.2009
Veronika Kubíková

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Gary Hon, Bing Ren, Wei Wang.
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ChromaSig: a probabilistic approach to finding common chromatin signatures in the human genome.
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PLoS Comput Biol,
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2008.
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28.4.2009
Martin Gallus

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Jun Z. Li, Devin M. Absher, Hua Tang, Audrey M. Southwick, Amanda M. Casto, Sohini Ramachandran, Howard M. Cann, Gregory S. Barsh, Marcus Feldman, Luigi L. Cavalli-Sforza, Richard M. Myers.
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Worldwide human relationships inferred from genome-wide patterns of variation.
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Science,
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2008.
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5.5.2009
Alena Hercegová

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Ting Wang, Jue Zeng, Craig B. Lowe, Robert G. Sellers, Sofie R. Salama, Min Yang, Shawn M. Burgess, Rainer K. Brachmann, David Haussler.
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Species-specific endogenous retroviruses shape the transcriptional network of the human tumor suppressor protein p53.
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Proceedings of the National Academy of Sciences of the United States of America,
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2007.
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12.5.2009
Marcela Kopásková

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Peter Donnelly.
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Progress and challenges in genome-wide association studies in humans.
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Nature,
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2008.
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26.5.2009
Tina Višňovská

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Naomi Habib, Tommy Kaplan, Hanah Margalit, Nir Friedman.
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A novel Bayesian DNA motif comparison method for clustering and retrieval.
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PLoS Comput Biol,
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2008.
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