@incollection{Brejova2008,
 author={Brona Brejova and  Daniel G. Brown and  Tomas Vinar},
 title={{Advances in hidden Markov models for sequence annotation}},
 editor={I. Mandoiu and  A. Zelikovski},
 booktitle={Bioinformatics Algorithms: Techniques and Applications},
 chapter={3},
 pages={55--92},
 year={2008},
 publisher={Wiley}
}