Leto 2011 (archívna kópia)
Rozvrh
| 2-AIN-506 a 2-AIN-252: Seminár z bioinformatiky (2) a (4) Leto 2011 (archívna kópia) Rozvrh |
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| Seminár: | ||
|---|---|---|
| Utorok 17:20, I-9 | ||
| Vyučujúci: | ||
| Mgr. Tomáš Vinař, PhD | M-163, |  |
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Konzultačné hodiny: TBA |
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| Oznamy: | ||
| Prvé stretnutie pre tento semester
bude v utorok 15.2. Ak sa plánujete seminára zúčastňovať, ale nemôžete
prísť na stretnutie, prosím pošlite mi e-mail, aby sme mohli prispôsobiť
organizáciu počtu ľudí. | ||
| Zoznam prezentácií: | ||
| 15.2.2011 Tomáš Vinař | Zasha Weinberg, Joy X. Wang, Jarrod Bogue, Jingying Yang, Keith Corbino, Ryan H. Moy, Ronald R. Breaker. Comparative genomics reveals 104 candidate structured RNAs from bacteria, archaea, and their metagenomes. Genome biology, 2010. link |
| 22.2.2011 Peter Kováč | Richard M. Durbin, Goncalo R. Abecasis, David L. Altshuler, Adam Auton, Lisa D. Brooks, Richard M. Durbin, Richard A. Gibbs, Matt E. Hurles, Gil A. McVean. A map of human genome variation from population-scale sequencing. Nature, 2010. link |
| 1.3.2011 Laci Rampášek | A. Biegert, J. Soding. Sequence context-specific profiles for homology searching. Proceedings of the National Academy of Sciences of the United States of America, 2009. link |
| 8.3.2011 Jakub Kováč | Mukul S. Bansal, J. Gordon Burleigh, Oliver Eulenstein, David Fernandez-Baca. Robinson-Foulds supertrees. Algorithms Mol Biol, 2010. link |
| 15.3.2011 Jaro Budiš | John Hawkins, Charles Grant, William Stafford Noble, Timothy L. Bailey. Assessing phylogenetic motif models for predicting transcription factor binding sites. Bioinformatics, 2009. link |
| 22.3.2011 Lenka Trojáková | Xin Yi et al.. Sequencing of 50 human exomes reveals adaptation to high altitude. Science, 2010. link |
| 29.3.2011 Martin Králik | Aakrosh Ratan, Yu Zhang, Vanessa M. Hayes, Stephan C. Schuster, Webb Miller. Calling SNPs without a reference sequence. BMC bioinformatics, 2010. link |
| 5.4.2011 Ivana Selečéniová | Raheleh Salari, Cagri Aksay, Emre Karakoc, Peter J. Unrau, Iman Hajirasouliha, S. Cenk Sahinalp. smyRNA: a novel Ab initio ncRNA gene finder. PLoS One, 2009. link |
| 12.4.2011 Pavol Kmeč | Seungtai Yoon, Zhenyu Xuan, Vladimir Makarov, Kenny Ye, Jonathan Sebat. Sensitive and accurate detection of copy number variants using read depth of coverage. Genome research, 2009. link |
| 18.4.2011 (pondelok!) Marcel Kucharík | Benedict Paten, Mark Diekhans, Dent Earl, John St John, Jian Ma, Bernard Suh, David Haussler. Cactus graphs for genome comparisons. Journal of computational biology, 2011. link |
| 27.4.2011 (streda!) Maťo Kravec | Melissa J. Hubisz, Michael F. Lin, Manolis Kellis, Adam Siepel. Error and error mitigation in low-coverage genome assemblies. PLoS One, 2011. link |
| 3.5.2011 Jožo Vavro | Michal Ziv-Ukelson, Irit Gat-Viks, Ydo Wexler, Ron Shamir. A faster algorithm for simultaneous alignment and folding of RNA. Journal of Computational Biology, 2010. Tento článok je už rezervovaný (J. Vavro). link |
| 10.5.2011 Martin Macko | Jeffrey Skolnick, Adrian K. Arakaki, Seung Yup Lee, Michal Brylinski. The continuity of protein structure space is an intrinsic property of proteins. Proceedings of the National Academy of Sciences of the United States of America, 2009. link |
| 17.5.2011 Lukáš Bača | Christian Widmer, Jose Leiva, Yasemin Altun, Gunnar Raetsch. Leveraging Sequence Classification by Taxonomy-Based Multitask Learning. In RECOMB, 2010. link |