1-DAV-202 Data Management 2023/24
Previously 2-INF-185 Data Source Integration

Materials · Introduction · Rules · Contact
· Grades from marked homeworks are on the server in file /grades/userid.txt


Difference between revisions of "Materials"

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| 2019-02-21 || (BB) Introduction to Perl (basics, input processing) [[L01|Lecture 1]], [[HW01|Homework 1]]
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| 2023-02-22 || (BB) || ALL || Introduction to the course || [https://goo.gl/forms/aKdhAAUZIGD80PrQ2 Survey], [[Contact]], [[Introduction]], [[Rules]], [[Connecting to server]], [[Editors]], [[Command-line basics]]
 
|-
 
|-
−
| 2019-02-28 || (BB) Command-line tools, Perl one-liners [[L02|Lecture 2]], [[HW02|Homework 2]]
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| || || || Introduction to Perl || [[Lperl|Lecture]], [[HWperl|Homework]]
 
|-
 
|-
−
| 2019-03-07 || (BB) Job scheduling and make [[L03|Lecture 3]], [[HW03|Homework 3]]
+
| 2023-02-29 || (BB) || ALL || Command-line tools, Perl one-liners || [[Lbash|Lecture]], [[HWbash|Homework]]
 
|-
 
|-
−
| 2019-03-14 || (BB) Python and SQL for beginners [[L04|Lecture 4]], [[HW04|Homework 4]]
+
| 2023-03-07 || (TV) || ALL || Job scheduling and make || [[Lmake|Lecture]], [[HWmake|Homework]]
 
|-
 
|-
−
| 2019-03-21 || (VB) Python, web crawling, HTML parsing, sqlite3 [[L05inf|Lecture 5 inf]], [[HW05inf|Homework 5 inf]]
+
| 2023-03-14 || (TV) || ALL || SQL (and Python) for beginners || [[Project]], [[Lsql|Lecture]], [[Python]], [[HWsql|Homework]]  
 
|-
 
|-
−
| || (BB) Bioinformatics 1 (genome assembly) [[L05bin|Lecture 5 bin]], [[HW05bin|Homework 5 bin]]
+
| 2023-03-21 || (VB) || INF/DAV || Python, web crawling, HTML parsing, sqlite3 || [[Lweb|Lecture]], [[HWweb|Homework]], [[Screen]]
 
|-
 
|-
−
| 2019-03-28 || (VB) Text data processing, flask [[L06inf|Lecture 6 inf]], [[HW06inf|Homework 6 inf]]  
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| || (TV) || BIN || Bioinformatics 1 (sequencing and genome assembly) || [[Lbioinf1|Lecture]], [[HWbioinf1|Homework]]
 
|-
 
|-
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| || (BB) Bioinformatics 2 (gene finding, RNA-seq) [[L06bin|Lecture 6 bin]], [[HW06bin|Homework 6 bin]]
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| 2023-03-28 || || || Easter
 
|-
 
|-
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| 2019-04-04 || (VB) Data visualization in JavaScript [[L07inf|Lecture 7 inf]], [[HW07inf|Homework inf]]
+
| 2023-04-04 || (VB) || INF/DAV || Text data processing, flask || [[Lflask|Lecture]], [[HWflask|Homework]]
 
|-
 
|-
−
| || (BB) Bioinformatics 3 (polymorphisms) [[L07bin|Lecture 7 bin]], [[HW07bin|Homework 7 bin]]
+
| || (TV) || BIN || Bioinformatics 2 (gene finding, RNA-seq) || [[Lbioinf2|Lecture]], [[HWbioinf2|Homework]]  
 
|-
 
|-
−
| 2019-04-11 || (BB) R, part 1 [[L08|Lecture 8]], [[HW08|Homework 8]]
+
| 2023-04-11 || (BB) || INF/DAV || Data visualization in JavaScript || [[Ljavascript|Lecture]], [[HWjavascript|Homework]]
 
|-
 
|-
−
| 2019-04-18 || Easter (project proposals due Wednesday April 17)
+
| || || || [[Project#Project_proposal|Project proposals]] due Friday April 12
 
|-
 
|-
−
| 2019-04-25 || (BB) no lecture
+
| || (TV) || BIN || Bioinformatics 3 (genome variants) || [[Lbioinf3|Lecture]], [[HWbioinf3|Homework]]
 
|-
 
|-
−
| 2019-05-02 || (BB) R, part 2 <!-- [[L10|Lecture 10]], [[HW10|Homework 10]]-->
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| 2023-04-18 || || || Student Research Conference
 
|-
 
|-
−
| 2019-05-09 || (VB/TV) Cloud computing
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| 2023-04-25 || || || No lecture
 
|-
 
|-
−
| 2019-05-16 || To be announced
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| 2023-05-02 || (BB) || ALL || Python + C++ || [[Lcpp|Lecture]], [[HWcpp|Homework]]
 +
|-
 +
| 2023-05-09 || (VB) || ALL || Cloud computing || <!-- [[Lcloud|Lecture]], [[HWcloud|Homework]] -->
 +
|-
 +
| 2023-05-16 || || || No lecture
 
|}
 
|}
 +
 +
 +
Optional materials:
 +
* If you are interested in R language, you can look at these lectures and homeworks. Files for the tasks are available on the server. However do not submit these homeworks.
 +
** [[Lr1]], [[HWr1]] tutorial to R and basic plotting
 +
** [[Lr2]], [[HWr2]] statistical tests in R

Latest revision as of 14:35, 2 May 2024

Here is a preliminary plan of lectures for this year (the topics and their order may change):

2023-02-22 (BB) ALL Introduction to the course Survey, Contact, Introduction, Rules, Connecting to server, Editors, Command-line basics
Introduction to Perl Lecture, Homework
2023-02-29 (BB) ALL Command-line tools, Perl one-liners Lecture, Homework
2023-03-07 (TV) ALL Job scheduling and make Lecture, Homework
2023-03-14 (TV) ALL SQL (and Python) for beginners Project, Lecture, Python, Homework
2023-03-21 (VB) INF/DAV Python, web crawling, HTML parsing, sqlite3 Lecture, Homework, Screen
(TV) BIN Bioinformatics 1 (sequencing and genome assembly) Lecture, Homework
2023-03-28 Easter
2023-04-04 (VB) INF/DAV Text data processing, flask Lecture, Homework
(TV) BIN Bioinformatics 2 (gene finding, RNA-seq) Lecture, Homework
2023-04-11 (BB) INF/DAV Data visualization in JavaScript Lecture, Homework
Project proposals due Friday April 12
(TV) BIN Bioinformatics 3 (genome variants) Lecture, Homework
2023-04-18 Student Research Conference
2023-04-25 No lecture
2023-05-02 (BB) ALL Python + C++ Lecture, Homework
2023-05-09 (VB) ALL Cloud computing
2023-05-16 No lecture


Optional materials:

  • If you are interested in R language, you can look at these lectures and homeworks. Files for the tasks are available on the server. However do not submit these homeworks.
    • Lr1, HWr1 tutorial to R and basic plotting
    • Lr2, HWr2 statistical tests in R
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