2-AIN-505, 2-AIN-251: Seminár z bioinformatiky (1) a (3)
Zima 2019
Rozvrh

Seminár:
Utorok 17:20, M-VIII
 
Vyučujúci:
doc. Mgr. Tomáš Vinař, PhD M-163,
 
 
doc. Mgr. Broňa Brejová, PhD M-163,
 
 
Oznamy:
Seminár začína 24.9.2019 prvou prezentáciou
 
Zoznam prezentácií:
24.9.2019
Askar Gafurov

Almodaresi F , Pandey P , Ferdman M , Johnson R , Patro R . An Efficient, Scalable and Exact Representation of High-Dimensional Color Information Enabled via de Bruijn Graph Search. In RECOMB 2019, 2019. link

1.10.2019
seminár nebude
8.10.2019
Dominika Szabová

Michal Levy-Sakin, Steven Pastor, Yulia Mostovoy, Le Li, Alden K. Y. Leung, Jennifer McCaffrey, Eleanor Young, Ernest T. Lam, Alex R. Hastie, Karen H. Y. Wong, Claire Y. L. Chung, Walfred Ma, Justin Sibert, Ramakrishnan Rajagopalan, Nana Jin, Eugene Y. C. Chow, Catherine Chu, Annie Poon, Chin Lin, Ahmed Naguib, Wei-Ping Wang, Han Cao, Ting-Fung Chan, Kevin Y. Yip, Ming Xiao, Pui-Yan Kwok. Genome maps across 26 human populations reveal population-specific patterns ofstructural variation. Nat Commun, 2019. link

15.10.2019
Samuel Molčan

Satoshi Koide, Keisuke Kawano, Takuro Kutsuna. Neural Edit Operations for Biological Sequences. In NIPS 2018, 2018. link

22.10.2019
Ondrej Vargovčík

Amaiur Esnaola, Aitor Arrizabalaga-Escudero, Jorge Gonzalez-Esteban, Arturo Elosegi, Joxerra Aihartza. Determining diet from faeces: Selection of metabarcoding primers for the insectivore Pyrenean desman (Galemys pyrenaicus). PLoS One, 2018. link

29.10.2019
Adrián Goga

Ryan R. Wick, Louise M. Judd, Kathryn E. Holt. Deepbinner: Demultiplexing barcoded Oxford Nanopore reads with deep convolutionalneural networks. PLoS Comput Biol, 2018. link

5.11.2019
Tereza Geisseová

Lee I , Razaghi R , Gilpatrick T , Sadowski N , Sedlazeck FJ , Timp W . Simultaneous profiling of chromatin accessibility and methylation on human cell lines with nanopore sequencing. Technical Report https://doi.org/10.1101/504993, bioRxiv, 2018. link

12.11.2019
Lucia Sucháňová

Jared T. Simpson, Rachael E. Workman, P. C. Zuzarte, Matei David, L. J. Dursi, Winston Timp. Detecting DNA cytosine methylation using nanopore sequencing. Nature methods, 2017. Supplement https://media.nature.com/original/nature-assets/nmeth/journal/v14/n4/extref/nmeth.4184-S1.pdf. link

19.11.2019
Eduard Batmendijn
26.11.2019
Fernando Eugénio
3.12.2019
10.12.2019
17.12.2019