1-DAV-202 Data Management 2024/25

Materials · Introduction · Rules · Contact
· Grades from marked homeworks are on the server in file /grades/userid.txt


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[[Connecting from Windows]]
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Here is a preliminary plan of lectures for this year (the topics and their order may change):
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* '''2025-02-20'''
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** ALL (TV): Introduction to the course · [https://goo.gl/forms/aKdhAAUZIGD80PrQ2 Survey],[[Contact]], [[Introduction]], [[Rules]], [[Connecting to server]], [[Editors]], [[Command-line basics]]
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** ALL (TV): Introduction to Perl · [[Lperl|Lecture]], [[HWperl|Homework]]
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* '''2025-02-27'''
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** ALL (BB): Command-line tools, Perl one-liners · [[Lbash|Lecture]], [[HWbash|Homework]]
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* '''2025-03-06'''
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** ALL (TV): Job scheduling and make · [[Lmake|Lecture]], [[HWmake|Homework]]
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* '''2025-03-13'''
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** ALL (TV): SQL (and Python) for beginners · [[Project]], [[Lsql|Lecture]], [[Python]], [[HWsql|Homework]]
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* '''2025-03-20'''
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**  INF/DAV (VB): Python, web crawling, HTML parsing, sqlite3 · [[Lweb|Lecture]], [[HWweb|Homework]], [[Screen]]
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** BIN (BB): Bioinformatics 1 (sequencing and genome assembly) · [[Lbioinf1|Lecture]], [[HWbioinf1|Homework]]
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* '''2025-03-27'''
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* '''2025-04-03'''
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** INF/DAV (VB): Text data processing, flask · [[Lflask|Lecture]], [[HWflask|Homework]]
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** BIN (TV): Bioinformatics 2 (gene finding, RNA-seq)· [[Lbioinf2|Lecture]], [[HWbioinf2|Homework]]
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* '''2025-04-10'''
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** INF/DAV (VB): Data visualization in JavaScript <!-- · [[Ljavascript|Lecture]], [[HWjavascript|Homework]] -->
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** BIN (TV): Bioinformatics 3 (genome variants) <!-- · [[Lbioinf3|Lecture]], [[HWbioinf3|Homework]] -->
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** [[Project#Project_proposal|Project proposals]] due Monday April 14
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* 2025-04-17 Easter
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* '''2025-04-24'''
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** ALL (BB): Python + C++ <!-- · [[Lcpp|Lecture]], [[HWcpp|Homework]] -->
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* 2024-05-01 Holiday
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* 2025-05-08 Holiday
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* '''2025-05-15'''
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** ALL (VB): Cloud computing <!-- · [[Lcloud|Lecture]], [[HWcloud|Homework]] -->
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* 2025-05-22 No lecture
  
Here is a preliminary plan of lectures for this year (the topics and their order may change):
 
  
{|
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Optional materials:
|-
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* If you are interested in R language, you can look at these lectures and homeworks. Files for the tasks are available on the server. However do not submit these homeworks.
| 2021-02-18 || (BB/TV) Introduction to Perl (basics, input processing)  [[Lperl|Lecture]], [[HWperl|Homework]]
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** [[Lr1]], [[HWr1]] tutorial to R and basic plotting
|-
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** [[Lr2]], [[HWr2]] statistical tests in R
| 2021-02-25 || (TV) Command-line tools, Perl one-liners  [[Lbash|Lecture]], [[HWbash|Homework]]
 
|-
 
| 2021-03-04 || (TV) Job scheduling and make [[Lmake|Lecture]], [[HWmake|Homework]]
 
|-
 
| 2021-03-11 || (BB) Python and SQL for beginners [[Lpython|Lecture]], [[HWpython|Homework]]
 
|-
 
| 2021-03-18 || (VB) Python, web crawling, HTML parsing, sqlite3 [[Lweb|Lecture INF]], [[HWweb|Homework INF]]
 
|-
 
| || (BB) Bioinformatics 1 (genome assembly) [[Lbioinf1|Lecture BIN]], [[HWbioinf1|Homework BIN]]
 
|-
 
| 2021-03-25 || (VB) Text data processing, flask [[Lflask|Lecture INF]], [[HWflask|Homework INF]]
 
|-
 
| || (AB) Bioinformatics 2 (gene finding, RNA-seq) [[Lbioinf2|Lecture BIN]], [[HWbioinf2|Homework BIN]]
 
|-
 
| 2021-04-01 || (VB) Data visualization in JavaScript [[Ljavascript|Lecture INF]], [[HWjavascript|Homework INF]]
 
|-
 
| || (AB) Bioinformatics 3 (polymorphisms) [[Lbioinf3|Lecture BIN]], [[HWbioinf3|Homework BIN]]
 
|-
 
| 2021-04-08 || (BB) R, part 1  [[Lr1|Lecture]], [[HWr1|Homework]]
 
|-
 
| 2021-04-15 || (BB) R, part 2 <!-- [[Lr2|Lecture]], [[HWr2|Homework]] -->
 
|-
 
| || [[Projekt#N.C3.A1vrh_projektu|Project proposals]] due Monday April 12
 
|-
 
| 2021-04-22 || (VB) Cloud computing <!-- [[Lcloud|Lecture]], [[HWcloud|Homework]] -->
 
|-
 
| 2021-04-29 || Topic to be announced
 
|-
 
| 2021-05-06 || Reserve, work on projects
 
|-
 
| 2021-05-13 || Reserve, work on projects
 
|}
 

Latest revision as of 11:56, 3 April 2025

Here is a preliminary plan of lectures for this year (the topics and their order may change):


Optional materials:

  • If you are interested in R language, you can look at these lectures and homeworks. Files for the tasks are available on the server. However do not submit these homeworks.
    • Lr1, HWr1 tutorial to R and basic plotting
    • Lr2, HWr2 statistical tests in R