1-DAV-202 Data Management 2023/24
Previously 2-INF-185 Data Source Integration
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- 19:24, 31 March 2020 diff hist +959 N HWjavascript Created page with "<!-- NOTEX --> See the lecture <!-- /NOTEX --> '''General goal:''' Extend the user pages from the previous lecture with simple visualizations. <!-- NOTEX -->..."
- 19:24, 31 March 2020 diff hist +753 N Ljavascript Created page with "=Ljavascript= <!-- NOTEX --> HWjavascript <!-- /NOTEX --> In this lecture we will extend the website from the previous lecture with interactive visualizations written in..."
- 14:33, 26 March 2020 diff hist -17 Materials
- 11:23, 25 March 2020 diff hist 0 HWflask
- 11:23, 25 March 2020 diff hist -20 HWflask
- 11:18, 25 March 2020 diff hist +2 HWbioinf2 →Task C: Visualizing in IGV
- 11:17, 25 March 2020 diff hist -4 HWbioinf2 →Task B: Aligning RNA-seq reads
- 11:15, 25 March 2020 diff hist +4 HWbioinf2 →Input files
- 11:14, 25 March 2020 diff hist +4,682 N HWbioinf2 Created page with "<!-- NOTEX --> See also the lecture Submit the protocol and the required files to <tt>/submit/bioinf2</tt> <!-- /NOTEX --> ===Input files=== Copy files from /ta..."
- 11:14, 25 March 2020 diff hist +1,927 N Lbioinf2 Created page with "<!-- NOTEX --> HWbioinf2 <!-- /NOTEX --> ==Eukaryotic gene structure== * Recall the Central dogma of molecular biology: the flow of genetic information from DNA to RNA to..."
- 11:08, 25 March 2020 diff hist +2 Lflask →NumPy arrays
- 11:08, 25 March 2020 diff hist -9 Lflask →Lflask
- 11:07, 25 March 2020 diff hist +1,675 N HWflask Created page with "<!-- NOTEX --> See the lecture <!-- /NOTEX --> '''General goal:''' Build a simple website, which lists all crawled users and for each users has a page with simple..."
- 11:06, 25 March 2020 diff hist +5,128 N Lflask Created page with "=Lflask= <!-- NOTEX --> HWflask <!-- /NOTEX --> In this lecture, we will use Python to process user comments obtained in the previous lecture. * We will display informat..."
- 15:38, 24 March 2020 diff hist +101 Lweb →Parsing webpages
- 15:35, 24 March 2020 diff hist +20 Lweb →Parsing webpages
- 15:34, 24 March 2020 diff hist 0 Lweb →Parsing webpages
- 15:33, 24 March 2020 diff hist +200 Lweb →Parsing webpages
- 14:58, 24 March 2020 diff hist +116 Lweb →Parsing webpages
- 14:57, 24 March 2020 diff hist +268 Lweb
- 14:53, 24 March 2020 diff hist +48 Lweb →Scraping webpages
- 12:53, 24 March 2020 diff hist -41 MediaWiki:Sitenotice
- 12:52, 24 March 2020 diff hist -4 MediaWiki:Sitenotice
- 12:51, 24 March 2020 diff hist +337 MediaWiki:Sitenotice
- 21:19, 18 March 2020 diff hist -8 Materials
- 18:51, 18 March 2020 diff hist -9 Materials
- 18:49, 18 March 2020 diff hist -1 HWbioinf1 →Task E: Align reads and assemblies to reference, visualize in IGV
- 18:48, 18 March 2020 diff hist +64 HWbioinf1 →Task E: Align reads and assemblies to reference, visualize in IGV
- 18:47, 18 March 2020 diff hist +94 Lbioinf1 →Sequence alignments and dotplots
- 14:22, 18 March 2020 diff hist +354 HWbioinf1 →Task A: examine input files
- 13:48, 18 March 2020 diff hist +14 HWbioinf1 →Task E: Align reads and assemblies to reference, visualize in IGV
- 13:45, 18 March 2020 diff hist +9 HWbioinf1 →Task C: compare assemblies using Quast command
- 13:44, 18 March 2020 diff hist +10 HWbioinf1 →Task D: create dotplots of assemblies
- 13:43, 18 March 2020 diff hist +1 HWbioinf1 →Task D: create dotplots of assemblies
- 13:42, 18 March 2020 diff hist -1 HWbioinf1 →Task D: create dotplots of assemblies
- 13:41, 18 March 2020 diff hist +71 HWbioinf1 →Task B: assemble the sequence from the reads
- 13:39, 18 March 2020 diff hist 0 HWbioinf1 →Task A: examine input files
- 13:36, 18 March 2020 diff hist +82 Lbioinf1 →Gzip
- 13:25, 18 March 2020 diff hist -2 Lbioinf1
- 13:24, 18 March 2020 diff hist +9,715 N HWbioinf1 Created page with "<!-- NOTEX --> See also the lecture Submit the protocol and the required files to <tt>/submit/bioinf1</tt> <!-- /NOTEX --> ===Task A: examine input files=== Cop..."
- 13:23, 18 March 2020 diff hist +5,141 N Lbioinf1 Created page with "<!-- NOTEX --> HWbioinf1 <!-- /NOTEX --> The next three lectures at targeted at the students in the Bioinformatics program and the goal is to get experience with several..."
- 18:20, 12 March 2020 diff hist +1,489 N HWweb Created page with "<!-- NOTEX --> See the lecture <!-- /NOTEX --> <!-- NOTEX --> Submit by copying requested files to <tt>/submit/web/username/</tt> <!-- /NOTEX --> '''General goal:''..."
- 18:19, 12 March 2020 diff hist -7 Lweb →Lweb
- 18:19, 12 March 2020 diff hist +2,042 N Lweb Created page with "=Lweb= <!-- NOTEX --> HWweb <!-- /NOTEX --> In this lecture, we will extract information from a website using Python and existing Python libraries. We will store the resu..."
- 17:52, 12 March 2020 diff hist +9 MediaWiki:Sitenotice
- 16:34, 12 March 2020 diff hist 0 HWbash →Task D (blast)
- 16:10, 12 March 2020 diff hist +103 HWsql
- 15:38, 12 March 2020 diff hist +94 MediaWiki:Sitenotice
- 18:37, 11 March 2020 diff hist 0 Materials
- 18:36, 11 March 2020 diff hist -9 Materials
