Lflask

HWflask

In this lecture, we will use Python to process user comments obtained in the previous lecture.

• We will display information about individual users as a dynamic website written in Flask framework
• We will use simple text processing utilities from ScikitLearn library to extract word use statistics from the comments

Flask

Flask is a simple web server for Python. Using Flask you can write a simple dynamic website in Python.

Running Flask

You can find a sample Flask application at /tasks/flask/simple_flask. Run it using these commands:

cd <your directory>
export FLASK_APP=main.py
export FLASK_ENV=development # this is optional, but recommended for debugging

# before running the following, change the port number
# so that no two users use the same number
flask run --port=PORT

PORT is a random number greater than 1024. This number should be different from other people running flask on the same machine (if you run into the problem where flask writes out lot of error messages complaining about permissions, select a different port number). Flask starts a webserver on port PORT and serves the pages created in your Flask application. Keep it running while you need to access these pages.

To view these pages, open a web browser on the same computer where the Flask is running, e.g. chromium-browser http://localhost:PORT/ (use the port number you have selected to run Flask). If you are running flask on our server, you probably want to run the web browser on your local machine. In such case, you need to use ssh tunnel to channel the traffic through ssh connection:

• on your local machine, open another console window and create an ssh tunnel as follows: ssh -L PORT:localhost:PORT vyuka.compbio.fmph.uniba.sk (replace PORT with the port number you have selected to run Flask)
• for windows machines, follow a tutorial how to create ssh tunnel, i.e. https://blog.devolutions.net/2017/04/how-to-configure-an-ssh-tunnel-on-putty
• keep this ssh connection open while you need to access your Flask web pages; it makes port PORT available on your local machine
• in your browser, you can now access your Flask webpages, using e.g. chromium-browser http://localhost:PORT/

Structure of a Flask application

• The provided Flask application resides in the main.py script.
• Some functions in this script are annotated with decorators starting with @app.
• Decorator @app.before_request marks a function which will be executed before processing a particular request from a web browser. In this case we open a database connection and store it in a special variable g which can be used to store variables for a particular request.
• Decorator @app.route('/') marks a function which will serve the main page of the application with URL http://localhost:4247/. Similarly decorator @app.route('/wat/<random_id>/') marks a function which will serve URLs of the form http://localhost:4247/wat/100 where the particular string which the user uses in the URL (here 100) will be stored in random_id variable accessible within the function.
• Functions serving a request return a string containing the requested webpage (typically a HTML document). For example, function wat returns a simple string without any HTML markup.
• To more easily construct a full HTML document, you can use jinja2 templating language, as is done in the home function. The template itself is in file templates/main.html.

Processing text

The main tool we will use for processing text is CountVectorizer class from the Scikit-learn library. It transforms a text into a bag of words representation. In this representation we get the list of word and the count for each word. Example:

from sklearn.feature_extraction.text import CountVectorizer

vec = CountVectorizer(strip_accents='unicode')

texts = [
 "Ema ma mamu.",
 "Zirafa sa vo vani kupe a hneva sa."
]

t = vec.fit_transform(texts).todense()

print(t)
# prints:
# [[1 0 0 1 1 0 0 0 0]
#  [0 1 1 0 0 2 1 1 1]]

print(vec.vocabulary_)
# prints:
# {'vani': 6, 'ema': 0, 'kupe': 2, 'mamu': 4, 
# 'hneva': 1, 'sa': 5, 'ma': 3, 'vo': 7, 'zirafa': 8}

NumPy arrays

Array t in the example above is a NumPy array provided by the NumPy library. This library has also lots of nice tricks. First let us create two matrices:

>>> import numpy as np
>>> a = np.array([[1,2,3],[4,5,6]])
>>> b = np.array([[7,8],[9,10],[11,12]])
>>> a
array([[1, 2, 3],
       [4, 5, 6]])
>>> b
array([[ 7,  8],
       [ 9, 10],
       [11, 12]])

We can sum these matrices or multiply them by some number:

>>> 3 * a
array([[ 3,  6,  9],
       [12, 15, 18]])
>>> a + 3 * a
array([[ 4,  8, 12],
       [16, 20, 24]])

We can calculate sum of elements in each matrix, or sum by some axis:

>>> np.sum(a)
21
>>> np.sum(a, axis=1)
array([ 6, 15])
>>> np.sum(a, axis=0)
array([5, 7, 9])

There are many other useful functions, check the documentation.