1-DAV-202 Data Management 2023/24
Previously 2-INF-185 Data Source Integration
Lcloud
Today we will work with Google Cloud (GCP), which is a cloud computing platform. GCP contains many services (virtual machines, kubernetes, storage, databases, ...). We are mainly interested in Dataflow and Storage. Dataflow allows highly parallel computation on large datasets. We will use an educational account which gives you a certain amount of resources for free.
Contents
Basic setup
You should have received instructions how to create GCloud account via MS Teams. You should be able to login to google cloud console. (TODO picture).
Now:
- Login to some Linux machine (ideally vyuka)
- If the machine is not vyuka, install gcloud command line package (I recommend via snap: [1]).
- Run gcloud init --console-only
- Follow instructions (copy link to browser, login and then copy code back to console).
Input files and data storage
Today we will use Gcloud storage to store input files and outputs. Think of it as some limited external disk (more like gdrive, than dropbox). You can just upload and download files, no random access to the middle of the file.
Run the following two commands to check if you can see the "bucket" (data storage) associated with this lecture:
# the following command should give you a big list of files
gsutil ls gs://mad-2022-public/
# this command downloads one file from the bucket
gsutil cp gs://mad-2022-public/splitaa splitaa
# the following command prints the file in your console
# (no need to do this).
gsutil cat gs://mad-2022-public/splitaa
You should also create your own bucket (storage area). Pick your own name, must be globally unique:
gsutil mb gs://mysuperawesomebucket
MapReduce
We will be using MapReduce in this session. It is kind of outdated concept, but simple enough for us and runs out of box on AWS. If you ever want to use BigData in practice, try something more modern like Apache Beam. And avoid PySpark if you can.
For tutorial on MapReduce check out PythonHosted.org or TutorialsPoint.com.
Template
If you want to use your own machine, please install packages with pip install mrjob boto3
You are given basic template with comments in /tasks/cloud/example_job.py
You can run it locally as follows:
python3 example_job.py <input file> -o <output_dir>
You can run it in the cloud on the whole dataset as follows:
python3 example_job.py -r emr --region us-east-1 s3://idzbucket2 \
--num-core-instances 4 -o s3://<your bucket>/<some directory>
For testing we recommend using a smaller sample as follows:
python3 example_job.py -r emr --region us-east-1 s3://idzbucket2/splita* \
--num-core-instances 4 -o s3://<your bucket>/<some directory>
Other useful commands
You can download output as follows:
# list of files
aws s3 ls s3://<your bucket>/<some directory>/
# download
aws s3 cp s3://<your bucket>/<some directory>/ . --recursive
If you want to watch progress:
- Click on AWS Console button workbench (vocareum).
- Set region (top right) to N. Virginia (us-east-1).
- Click on services, then EMR.
- Click on the job, which is running, then Steps, view logs, syslog.