Basic Information
| Name | Ribosomal protein VAR1, mitochondrial (Mitochondrial small ribosomal subunit protein uS3m) |
| Uniprot ID | P02381 |
| Systematic gene name | Q0140 |
| Standard gene name | VAR1 |
| Gene names | VAR1 Q0140 |
| Description from SGD | Q0140 VAR1 SGDID:S000007275, Chr Mito from 48901-50097, Genome Release 64-3-1, Verified ORF, "Mitochondrial ribosomal protein of the small subunit; mitochondrially-encoded; polymorphic in different strains due to variation in number of AAT (asparagine) codons; translated near the mitochondrial inner membrane; may have a role in loss of mitochondrial DNA under stress conditions" |
| Protein length | 398 |
| Download | sequence (fasta, from Uniprot), modifications (csv format) |
| Database links | Uniprot, SGD, TheCellVision.org, FungiDB |
Sequence
MKLKLLNMIL SMMNKTNNNN NIIINNTLDS LMNKKLLLKN MLLDMNNKKM
NNMKRMLNNN NMNPAGANPV VHRIGPAGNI NNKLQHLNNM NNWNTQIYNY
NKNMEIMNTM NDKLINKLLY KMMTLKLNNM NINKIIMSKT INQHSLNKLN
IKFYYYNNDI NNNNNNNNNN YYMNMMNKLM NIMNNNMNNN LCNILSYYYK
KKVTIEPIKL SYIYLNSDIF SKYISLNDMD KYNNGILTNY QRMLNNIMPK
LNDHNISMNY INNINNINNN KYNNMINLLN NNNNINNNNN YNNNNNNYIG
NINNIYNNMT IDNIPMDILM YKYLVGWSIK FKGRLSNNNG RTSTTNLLNG
TFNNKKYLWS NINNNYKLNY IPSNHNLYNN SNINKNGKYN IKVKLNFI
NNMKRMLNNN NMNPAGANPV VHRIGPAGNI NNKLQHLNNM NNWNTQIYNY
NKNMEIMNTM NDKLINKLLY KMMTLKLNNM NINKIIMSKT INQHSLNKLN
IKFYYYNNDI NNNNNNNNNN YYMNMMNKLM NIMNNNMNNN LCNILSYYYK
KKVTIEPIKL SYIYLNSDIF SKYISLNDMD KYNNGILTNY QRMLNNIMPK
LNDHNISMNY INNINNINNN KYNNMINLLN NNNNINNNNN YNNNNNNYIG
NINNIYNNMT IDNIPMDILM YKYLVGWSIK FKGRLSNNNG RTSTTNLLNG
TFNNKKYLWS NINNNYKLNY IPSNHNLYNN SNINKNGKYN IKVKLNFI
Legend
- X SUMOylation
- X K-Succinylation
Structure
Structure visualized by GLmol written by biochem_fan. The structure was downloaded from the AlphaFold Protein Structure Database.
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References
| [2, SUMO] | Bhagwat, N.R., Owens, S.N., Ito, M., Boinapalli, J.V,, Poa, P., Ditzel, A., Kopparapu, S., Mahalawat, M., Davies, O.R., Collins, S.R., Johnson, J.R., Krogan, N.J., Hunter, N. (2021). SUMO is a pervasive regulator of meiosis. Elife 10:e57720. (Publication) (All modifications) |
| [4, SUMO] | Bhagwat, N.R., Owens, S.N., Ito, M., Boinapalli, J.V,, Poa, P., Ditzel, A., Kopparapu, S., Mahalawat, M., Davies, O.R., Collins, S.R., Johnson, J.R., Krogan, N.J., Hunter, N. (2021). SUMO is a pervasive regulator of meiosis. Elife 10:e57720. (Publication) (All modifications) |
| [117, K-succ] | Frankovsky, J., Keresztesová, B., Bellová, J., et al. (2021). The yeast mitochondrial succinylome: Implications for regulation of mitochondrial nucleoids. Journal of Biological Chemistry, 297(4): 101155. (Publication) (All modifications) |