Basic Information
Name | Nuclear protein localization protein 4 (HMG-CoA reductase degradation protein 4) |
Uniprot ID | P33755 |
Systematic gene name | YBR170C |
Standard gene name | NPL4 |
Gene names | NPL4 HRD4 YBR170C YBR1231 |
Description from SGD | YBR170C NPL4 SGDID:S000000374, Chr II from 578086-576344, Genome Release 64-3-1, reverse complement, Verified ORF, "Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase; assists Cdc48p in the dislocation of misfolded, polyubiquitinated ERAD substrates that are subsequently delivered to the proteasome for degradation; also involved in the regulated destruction of resident ER membrane proteins, such as HMG-CoA reductase (Hmg1/2p) and cytoplasmic proteins (Fbp1p); role in mobilizing membrane bound transcription factors by regulated ubiquitin/proteasome-dependent processing (RUP)" |
Protein length | 580 |
Download | sequence (fasta, from Uniprot), modifications (csv format) |
Database links | Uniprot, SGD, TheCellVision.org, FungiDB |
Sequence
MLIRFRSKNG THRVSCQEND LFGTVIEKLV GNLDPNADVD TFTVCEKPGQ
GIHAVSELAD RTVMDLGLKH GDMLILNYSD KPANEKDGVN VEIGSVGIDS
KGIRQHRYGP LRIKELAVDE ELEKEDGLIP RQKSKLCKHG DRGMCEYCSP
LPPWDKEYHE KNKIKHISFH SYLKKLNENA NKKENGSSYI SPLSEPDFRI
NKRCHNGHEP WPRGICSKCQ PSAITLQQQE FRMVDHVEFQ KSEIINEFIQ
AWRYTGMQRF GYMYGSYSKY DNTPLGIKAV VEAIYEPPQH DEQDGLTMDV
EQVKNEMLQI DRQAQEMGLS RIGLIFTDLS DAGAGDGSVF CKRHKDSFFL
SSLEVIMAAR HQTRHPNVSK YSEQGFFSSK FVTCVISGNL EGEIDISSYQ
VSTEAEALVT ADMISGSTFP SMAYINDTTD ERYVPEIFYM KSNEYGITVK
ENAKPAFPVD YLLVTLTHGF PNTDTETNSK FVSSTGFPWS NRQAMGQSQD
YQELKKYLFN VASSGDFNLL HEKISNFHLL LYINSLQILS PDEWKLLIES
AVKNEWEESL LKLVSSAGWQ TLVMILQESG
GIHAVSELAD RTVMDLGLKH GDMLILNYSD KPANEKDGVN VEIGSVGIDS
KGIRQHRYGP LRIKELAVDE ELEKEDGLIP RQKSKLCKHG DRGMCEYCSP
LPPWDKEYHE KNKIKHISFH SYLKKLNENA NKKENGSSYI SPLSEPDFRI
NKRCHNGHEP WPRGICSKCQ PSAITLQQQE FRMVDHVEFQ KSEIINEFIQ
AWRYTGMQRF GYMYGSYSKY DNTPLGIKAV VEAIYEPPQH DEQDGLTMDV
EQVKNEMLQI DRQAQEMGLS RIGLIFTDLS DAGAGDGSVF CKRHKDSFFL
SSLEVIMAAR HQTRHPNVSK YSEQGFFSSK FVTCVISGNL EGEIDISSYQ
VSTEAEALVT ADMISGSTFP SMAYINDTTD ERYVPEIFYM KSNEYGITVK
ENAKPAFPVD YLLVTLTHGF PNTDTETNSK FVSSTGFPWS NRQAMGQSQD
YQELKKYLFN VASSGDFNLL HEKISNFHLL LYINSLQILS PDEWKLLIES
AVKNEWEESL LKLVSSAGWQ TLVMILQESG
Legend
- X Phoshorylation
- X Ubiquitination
Structure
Structure visualized by GLmol written by biochem_fan. The structure was downloaded from the AlphaFold Protein Structure Database.
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References
[15, Phos] | Lanz MC, Yugandhar K, Gupta S, Sanford EJ, Faça VM, Vega S, Joiner AMN, Fromme JC, Yu H, Smolka MB (2021). In-depth and 3-dimensional exploration of the budding yeast phosphoproteome. EMBO Reports, e51121. (Publication) (All modifications) |
[15, Phos] | Zhou, X., Li, W., Liu, Y., Amon, A. (2021. Cross-compartment signal propagation in the mitotic exit network. Elife 10:e63645. (Publication) (All modifications) |
[15, Phos] | MacGilvray, M.E., Shishkova, E., Place, M., Wagner, E.R., Coon, J.J., Gasch, A.P. (2020). Phosphoproteome response to dithiothreitol reveals unique versus shared features of Saccharomyces cerevisiae stress responses. Journal of Proteome Research 19(8): 3405-3417. (Publication) (All modifications) |
[56, Phos] | Bai Y, Chen B, Li M, et al (2017) FPD: A comprehensive phosphorylation database in fungi. Fungal Biology 121:869–875. (Publication) (All modifications) |
[56, Phos] | Frankovsky, J., Vozáriková, V., Nosek, J., Tomáška, Ľ. (2021a). Mitochondrial protein phosphorylation in yeast revisited.Mitochondrion 57:148-162. (Publication) (All modifications) |
[95, Phos] | Bai Y, Chen B, Li M, et al (2017) FPD: A comprehensive phosphorylation database in fungi. Fungal Biology 121:869–875. (Publication) (All modifications) |
[95, Phos] | Zhou, X., Li, W., Liu, Y., Amon, A. (2021. Cross-compartment signal propagation in the mitotic exit network. Elife 10:e63645. (Publication) (All modifications) |
[95, Phos] | Frankovsky, J., Vozáriková, V., Nosek, J., Tomáška, Ľ. (2021a). Mitochondrial protein phosphorylation in yeast revisited.Mitochondrion 57:148-162. (Publication) (All modifications) |
[191, Phos] | Lanz MC, Yugandhar K, Gupta S, Sanford EJ, Faça VM, Vega S, Joiner AMN, Fromme JC, Yu H, Smolka MB (2021). In-depth and 3-dimensional exploration of the budding yeast phosphoproteome. EMBO Reports, e51121. (Publication) (All modifications) |
[218, Ubi] | Swaney, D.L., Beltrao, P., Starita, L., Guo, A., Rush, J., Fields, S., Krogan, N.J., Villén, J. (2013). Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation. Nature Methods 10(7): 676-682. (Publication) (All modifications) |
[269, Ubi] | Swaney, D.L., Beltrao, P., Starita, L., Guo, A., Rush, J., Fields, S., Krogan, N.J., Villén, J. (2013). Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation. Nature Methods 10(7): 676-682. (Publication) (All modifications) |
[342, Ubi] | Swaney, D.L., Beltrao, P., Starita, L., Guo, A., Rush, J., Fields, S., Krogan, N.J., Villén, J. (2013). Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation. Nature Methods 10(7): 676-682. (Publication) (All modifications) |
[498, Phos] | Lanz MC, Yugandhar K, Gupta S, Sanford EJ, Faça VM, Vega S, Joiner AMN, Fromme JC, Yu H, Smolka MB (2021). In-depth and 3-dimensional exploration of the budding yeast phosphoproteome. EMBO Reports, e51121. (Publication) (All modifications) |