P37298 y-mtPTM: Yeast Mitochondrial PTM Database

Basic Information

Name	Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial (CybS) (Succinate-ubiquinone reductase membrane anchor subunit)
Uniprot ID	P37298
Systematic gene name	YDR178W
Standard gene name	SDH4
Gene names	SDH4 ACN18 YDR178W YD9395.11
Description from SGD	YDR178W SDH4 SGDID:S000002585, Chr IV from 817950-818495, Genome Release 64-3-1, Verified ORF, "Membrane anchor subunit of succinate dehydrogenase (SDH); involved in coupling the oxidation of succinate to the transfer of electrons to ubiquinone as part of the TCA cycle and the mitochondrial respiratory chain; has similarity to human SDH subunit D (SDHD), which is implicated in paraganglioma"
Protein length	181
Download	sequence (fasta, from Uniprot), modifications (csv format)
Database links	Uniprot, SGD, TheCellVision.org, FungiDB

Sequence

MMLPRSMKFM TGRRIFHTAT VRAFQSTAKK SLTIPFLPVL PQKPGGVRGT
PNDAYVPPPE NKLEGSYHWY MEKIFALSVV PLATTAMLTT GPLSTAADSF
FSVMLLGYCY MEFNSCITDY ISERVYGVWH KYAMYMLGLG SAVSLFGIYK
LETENDGVVG LVKSLWDSSE KDNSQKIEAK K

Legend

X Phoshorylation
X SUMOylation
X K-Succinylation

Structure

Structure visualized

Loading structure by GLmol written by biochem_fan. The structure was downloaded from the AlphaFold Protein Structure Database. id="glmol01_src" style="display: none;"> -18.040 -52.949 -84.846 1.00 48.34 N -18.798 -53.905 -84.000 1.00 48.34 C -18.301 -53.649 -82.577 1.00 48.34 C -17.106 -53.772 -82.398 1.00 48.34 O -18.471 -55.333 -84.504 1.00 48.34 C -19.608 -56.353 -84.414 1.00 48.34 C -19.208 -57.864 -85.331 1.00 48.34 S -20.780 -58.763 -85.238 1.00 48.34 C -19.007 -53.131 -81.569 1.00 53.62 N -20.427 -52.942 -81.246 1.00 53.62 C -20.663 -51.532 -80.644 1.00 53.62 C -19.736 -50.754 -80.459 1.00 53.62 O -20.834 -54.033 -80.228 1.00 53.62 C -21.044 -55.392 -80.901 1.00 53.62 C -20.953 -56.833 -79.807 1.00 53.62 S -22.606 -56.866 -79.064 1.00 53.62 C -21.942 -51.233 -80.439 1.00 61.90 N -22.657 -49.962 -80.279 1.00 61.90 C -22.460 -49.191 -78.937 1.00 61.90 C -21.762 -49.669 -78.048 1.00 61.90 O -24.127 -50.387 -80.528 1.00 61.90 C -24.506 -50.485 -82.019 1.00 61.90 C -25.818 -51.253 -82.139 1.00 61.90 C -24.701 -49.125 -82.697 1.00 61.90 C -23.064 -47.982 -78.808 1.00 60.91 N -22.700 -46.914 -77.875 1.00 60.91 C -23.694 -46.731 -76.704 1.00 60.91 C -24.658 -47.469 -76.560 1.00 60.91 O -22.719 -45.687 -78.807 1.00 60.91 C -23.972 -45.909 -79.646 1.00 60.91 C -24.028 -47.420 -79.752 1.00 60.91 C -23.505 -45.608 -75.989 1.00 61.03 N -24.507 -44.782 -75.279 1.00 61.03 C -25.172 -45.334 -74.002 1.00 61.03 C -26.090 -46.134 -74.045 1.00 61.03 O -25.586 -44.260 -76.264 1.00 61.03 C -25.345 -42.823 -76.747 1.00 61.03 C -26.469 -42.383 -77.698 1.00 61.03 C -26.485 -40.916 -77.888 1.00 61.03 N -26.894 -40.251 -78.958 1.00 61.03 C -27.290 -40.850 -80.046 1.00 61.03 N1+ -26.913 -38.947 -78.954 1.00 61.03 N -24.916 -44.557 -72.944 1.00 61.02 N -25.917 -43.936 -72.061 1.00 61.02 C -26.472 -44.726 -70.868 1.00 61.02 C -26.983 -45.829 -70.987 1.00 61.02 O -27.077 -43.342 -72.874 1.00 61.02 C -27.779 -42.366 -72.126 1.00 61.02 O -26.532 -43.969 -69.767 1.00 61.80 N -27.529 -43.974 -68.692 1.00 61.80 C -27.148 -44.571 -67.317 1.00 61.80 C -27.303 -45.751 -67.046 1.00 61.80 O -28.969 -44.282 -69.186 1.00 61.80 C -29.864 -43.051 -69.003 1.00 61.80 C -31.582 -43.162 -69.556 1.00 61.80 S -31.424 -42.624 -71.279 1.00 61.80 C -26.788 -43.622 -66.432 1.00 52.93 N -27.203 -43.428 -65.025 1.00 52.93 C -26.798 -44.471 -63.972 1.00 52.93 C -27.416 -45.515 -63.838 1.00 52.93 O -28.723 -43.166 -64.963 1.00 52.93 C -29.139 -41.831 -65.603 1.00 52.93 C -30.670 -41.690 -65.639 1.00 52.93 C -31.087 -40.470 -66.471 1.00 52.93 C -32.559 -40.275 -66.451 1.00 52.93 N1+ -25.928 -44.025 -63.064 1.00 60.21 N -25.962 -44.420 -61.655 1.00 60.21 C -26.130 -43.170 -60.780 1.00 60.21 C -25.342 -42.230 -60.864 1.00 60.21 O -24.727 -45.249 -61.275 1.00 60.21 C -25.048 -46.722 -61.132 1.00 60.21 C -25.430 -47.237 -59.878 1.00 60.21 C -25.020 -47.567 -62.256 1.00 60.21 C -25.769 -48.596 -59.748 1.00 60.21 C -25.355 -48.926 -62.125 1.00 60.21 C -25.728 -49.441 -60.871 1.00 60.21 C -27.190 -43.162 -59.972 1.00 56.36 N -27.474 -42.187 -58.922 1.00 56.36 C -27.475 -42.940 -57.589 1.00 56.36 C -28.395 -43.699 -57.310 1.00 56.36 O -28.832 -41.509 -59.195 1.00 56.36 C -29.211 -40.457 -58.142 1.00 56.36 C -30.818 -39.654 -58.419 1.00 56.36 S -31.953 -40.992 -57.952 1.00 56.36 C -26.451 -42.716 -56.776 1.00 65.18 N -26.311 -43.128 -55.369 1.00 65.18 C -25.244 -42.195 -54.799 1.00 65.18 C -24.239 -41.947 -55.448 1.00 65.18 O -25.828 -44.593 -55.209 1.00 65.18 C -26.976 -45.576 -54.994 1.00 65.18 C -25.101 -45.052 -56.329 1.00 65.18 O -25.326 -41.568 -53.639 1.00 61.46 N -26.243 -41.543 -52.515 1.00 61.46 C -25.536 -40.665 -51.465 1.00 61.46 C -24.306 -40.621 -51.427 1.00 61.46 O -26.308 -39.910 -50.678 1.00 55.83 N -25.892 -39.009 -49.582 1.00 55.83 C -24.538 -39.343 -48.923 1.00 55.83 C -24.391 -40.403 -48.321 1.00 55.83 O -26.962 -39.128 -48.480 1.00 55.83 C -28.240 -38.307 -48.698 1.00 55.83 C -29.324 -38.818 -47.733 1.00 55.83 C -30.187 -37.746 -47.207 1.00 55.83 N -31.140 -37.909 -46.301 1.00 55.83 C -31.501 -39.089 -45.876 1.00 55.83 N1+ -31.755 -36.880 -45.790 1.00 55.83 N -23.630 -38.362 -48.859 1.00 57.39 N -22.695 -38.223 -47.731 1.00 57.39 C -22.958 -36.896 -47.033 1.00 57.39 C -22.993 -35.840 -47.655 1.00 57.39 O -21.225 -38.396 -48.140 1.00 57.39 C -20.896 -39.867 -48.444 1.00 57.39 C -19.379 -40.087 -48.501 1.00 57.39 C -19.049 -41.459 -48.935 1.00 57.39 N -17.909 -42.103 -48.741 1.00 57.39 C -16.923 -41.586 -48.060 1.00 57.39 N1+ -17.736 -43.296 -49.236 1.00 57.39 N -23.218 -37.010 -45.740 1.00 66.08 N -23.462 -35.932 -44.791 1.00 66.08 C -22.107 -35.256 -44.564 1.00 66.08 C -21.185 -35.885 -44.046 1.00 66.08 O -24.056 -36.562 -43.504 1.00 66.08 C -25.381 -37.315 -43.807 1.00 66.08 C -24.279 -35.507 -42.409 1.00 66.08 C -25.823 -38.264 -42.687 1.00 66.08 C -21.951 -34.009 -45.005 1.00 65.47 N -20.761 -33.226 -44.691 1.00 65.47 C -20.854 -32.769 -43.234 1.00 65.47 C -21.743 -32.002 -42.869 1.00 65.47 O -20.594 -32.058 -45.674 1.00 65.47 C -20.118 -32.491 -47.050 1.00 65.47 C -18.752 -32.760 -47.266 1.00 65.47 C -21.031 -32.639 -48.111 1.00 65.47 C -18.303 -33.171 -48.534 1.00 65.47 C -20.581 -33.048 -49.380 1.00 65.47 C -19.217 -33.313 -49.592 1.00 65.47 C -19.935 -33.259 -42.404 1.00 64.00 N -19.660 -32.689 -41.093 1.00 64.00 C -19.209 -31.237 -41.289 1.00 64.00 C -18.119 -30.982 -41.798 1.00 64.00 O -18.563 -33.511 -40.393 1.00 64.00 C -19.039 -34.819 -39.813 1.00 64.00 C -19.285 -35.988 -40.484 1.00 64.00 C -19.287 -35.061 -38.480 1.00 64.00 N -19.672 -36.341 -38.351 1.00 64.00 C -19.689 -36.945 -39.548 1.00 64.00 N -20.034 -30.274 -40.884 1.00 62.42 N -19.586 -28.896 -40.675 1.00 62.42 C -18.660 -28.890 -39.465 1.00 62.42 C -19.115 -28.881 -38.323 1.00 62.42 O -20.772 -27.940 -40.468 1.00 62.42 C -21.427 -27.573 -41.797 1.00 62.42 C -21.750 -28.545 -39.652 1.00 62.42 O -17.352 -28.951 -39.711 1.00 65.93 N -16.351 -28.685 -38.693 1.00 65.93 C -16.455 -27.206 -38.300 1.00 65.93 C -16.043 -26.319 -39.047 1.00 65.93 O -14.966 -29.063 -39.238 1.00 65.93 C -17.039 -26.929 -37.136 1.00 66.20 N -16.997 -25.603 -36.527 1.00 66.20 C -15.540 -25.319 -36.178 1.00 66.20 C -15.006 -25.868 -35.212 1.00 66.20 O -17.898 -25.505 -35.275 1.00 66.20 C -18.579 -24.141 -35.186 1.00 66.20 C -18.926 -26.471 -35.301 1.00 66.20 O -14.869 -24.492 -36.985 1.00 63.85 N -13.568 -23.923 -36.628 1.00 63.85 C -13.802 -23.130 -35.349 1.00 63.85 C -14.405 -22.058 -35.372 1.00 63.85 O -12.993 -23.043 -37.760 1.00 63.85 C -11.656 -22.403 -37.361 1.00 63.85 C -12.755 -23.877 -39.026 1.00 63.85 C -13.391 -23.690 -34.206 1.00 62.72 N -13.308 -22.939 -32.957 1.00 62.72 C -12.315 -21.816 -33.223 1.00 62.72 C -11.114 -22.063 -33.298 1.00 62.72 O -12.867 -23.839 -31.787 1.00 62.72 C -13.981 -24.788 -31.316 1.00 62.72 C -13.507 -25.619 -30.116 1.00 62.72 C -14.577 -26.501 -29.604 1.00 62.72 N -14.418 -27.583 -28.858 1.00 62.72 C -13.239 -28.009 -28.496 1.00 62.72 N1+ -15.453 -28.265 -28.454 1.00 62.72 N -12.827 -20.605 -33.430 1.00 65.33 N -12.023 -19.398 -33.439 1.00 65.33 C -11.433 -19.256 -32.033 1.00 65.33 C -12.068 -18.720 -31.125 1.00 65.33 O -12.898 -18.209 -33.864 1.00 65.33 C -10.250 -19.830 -31.827 1.00 66.39 N -9.471 -19.603 -30.626 1.00 66.39 C -9.154 -18.110 -30.583 1.00 66.39 C -8.393 -17.603 -31.399 1.00 66.39 O -8.216 -20.488 -30.619 1.00 66.39 C -8.473 -21.904 -30.133 1.00 66.39 C -8.464 -22.175 -28.751 1.00 66.39 C -8.712 -22.950 -31.044 1.00 66.39 C -8.680 -23.483 -28.283 1.00 66.39 C -8.924 -24.261 -30.576 1.00 66.39 C -8.903 -24.528 -29.196 1.00 66.39 C -9.825 -17.416 -29.666 1.00 65.58 N -9.482 -16.086 -29.189 1.00 65.58 C -9.207 -15.051 -30.300 1.00 65.58 C -8.076 -14.639 -30.545 1.00 65.58 O -8.342 -16.269 -28.176 1.00 65.58 C -8.114 -15.014 -27.339 1.00 65.58 C -7.009 -15.186 -26.305 1.00 65.58 C -6.439 -14.099 -25.842 1.00 65.58 N -6.651 -16.275 -25.892 1.00 65.58 O -10.276 -14.522 -30.905 1.00 64.14 N -10.213 -13.188 -31.516 1.00 64.14 C -10.233 -12.139 -30.398 1.00 64.14 C -11.234 -11.464 -30.163 1.00 64.14 O -11.338 -12.976 -32.537 1.00 64.14 C -11.122 -11.774 -33.255 1.00 64.14 O -9.148 -12.026 -29.627 1.00 68.16 N -8.977 -10.837 -28.789 1.00 68.16 C -8.666 -9.695 -29.742 1.00 68.16 C -7.553 -9.582 -30.256 1.00 68.16 O -7.900 -10.995 -27.705 1.00 68.16 C -7.732 -9.742 -26.845 1.00 68.16 C -8.276 -12.004 -26.801 1.00 68.16 O -9.667 -8.853 -30.012 1.00 65.45 N -9.426 -7.551 -30.612 1.00 65.45 C -8.305 -6.875 -29.813 1.00 65.45 C -8.375 -6.835 -28.583 1.00 65.45 O -10.723 -6.732 -30.580 1.00 65.45 C -7.272 -6.364 -30.495 1.00 61.72 N -6.216 -5.561 -29.868 1.00 61.72 C -6.828 -4.255 -29.353 1.00 61.72 C -6.683 -3.208 -29.972 1.00 61.72 O -5.061 -5.288 -30.852 1.00 61.72 C -4.222 -6.524 -31.208 1.00 61.72 C -2.991 -6.100 -32.025 1.00 61.72 C -2.110 -7.309 -32.359 1.00 61.72 C -0.853 -6.905 -33.041 1.00 61.72 N1+ -7.555 -4.308 -28.240 1.00 59.40 N -8.000 -3.127 -27.514 1.00 59.40 C -6.880 -2.758 -26.561 1.00 59.40 C -6.859 -3.173 -25.410 1.00 59.40 O -9.363 -3.347 -26.838 1.00 59.40 C -10.467 -3.592 -27.883 1.00 59.40 C -11.836 -3.105 -27.392 1.00 59.40 C -12.895 -3.316 -28.483 1.00 59.40 C -14.119 -2.518 -28.220 1.00 59.40 N1+ -5.909 -2.015 -27.085 1.00 67.92 N -5.068 -1.200 -26.218 1.00 67.92 C -6.009 -0.207 -25.542 1.00 67.92 C -6.649 0.588 -26.232 1.00 67.92 O -3.992 -0.489 -27.042 1.00 67.92 C -3.239 0.379 -26.224 1.00 67.92 O -6.167 -0.310 -24.221 1.00 70.91 N -6.885 0.679 -23.423 1.00 70.91 C -6.045 1.963 -23.440 1.00 70.91 C -5.244 2.229 -22.553 1.00 70.91 O -7.176 0.094 -22.023 1.00 70.91 C -8.214 0.874 -21.186 1.00 70.91 C -8.666 0.016 -20.004 1.00 70.91 C -7.695 2.199 -20.626 1.00 70.91 C -6.170 2.716 -24.528 1.00 77.51 N -5.652 4.074 -24.651 1.00 77.51 C -6.814 5.003 -24.355 1.00 77.51 C -7.837 4.959 -25.041 1.00 77.51 O -5.068 4.333 -26.044 1.00 77.51 C -4.487 5.742 -26.157 1.00 77.51 C -4.010 3.435 -26.299 1.00 77.51 O -6.684 5.806 -23.304 1.00 81.17 N -7.719 6.754 -22.899 1.00 81.17 C -7.790 7.845 -23.983 1.00 81.17 C -6.808 8.561 -24.170 1.00 81.17 O -7.397 7.305 -21.496 1.00 81.17 C -7.400 6.164 -20.449 1.00 81.17 C -8.429 8.373 -21.108 1.00 81.17 C -6.745 6.534 -19.113 1.00 81.17 C -8.910 7.989 -24.718 1.00 80.39 N -8.942 8.731 -25.984 1.00 80.39 C -8.654 10.234 -25.850 1.00 80.39 C -8.334 10.880 -26.841 1.00 80.39 O -10.339 8.472 -26.564 1.00 80.39 C -11.188 8.124 -25.343 1.00 80.39 C -10.201 7.374 -24.456 1.00 80.39 C -8.772 10.793 -24.644 1.00 85.33 N -8.573 12.217 -24.367 1.00 85.33 C -7.230 12.542 -23.695 1.00 85.33 C -6.927 13.718 -23.501 1.00 85.33 O -9.761 12.718 -23.535 1.00 85.33 C -9.940 12.010 -22.203 1.00 85.33 C -10.838 10.932 -22.090 1.00 85.33 C -9.220 12.439 -21.072 1.00 85.33 C -11.020 10.290 -20.852 1.00 85.33 C -9.397 11.792 -19.836 1.00 85.33 C -10.296 10.719 -19.726 1.00 85.33 C -6.427 11.538 -23.325 1.00 84.58 N -5.136 11.765 -22.678 1.00 84.58 C -3.990 11.647 -23.694 1.00 84.58 C -3.912 10.648 -24.412 1.00 84.58 O -4.940 10.810 -21.492 1.00 84.58 C -5.866 11.063 -20.291 1.00 84.58 C -5.533 10.068 -19.182 1.00 84.58 C -5.711 12.468 -19.710 1.00 84.58 C -3.075 12.632 -23.758 1.00 84.83 N -1.908 12.546 -24.622 1.00 84.83 C -0.977 11.425 -24.149 1.00 84.83 C -0.697 11.292 -22.955 1.00 84.83 O -1.245 13.924 -24.556 1.00 84.83 C -1.635 14.434 -23.170 1.00 84.83 C -3.035 13.856 -22.973 1.00 84.83 C -0.469 10.650 -25.105 1.00 86.57 N 0.499 9.578 -24.859 1.00 86.57 C 1.895 9.994 -25.316 1.00 86.57 C 2.074 10.577 -26.385 1.00 86.57 O 0.061 8.236 -25.477 1.00 86.57 C -1.235 7.735 -24.827 1.00 86.57 C -0.152 8.292 -26.996 1.00 86.57 C 2.903 9.679 -24.508 1.00 86.88 N 4.308 9.848 -24.849 1.00 86.88 C 4.720 8.809 -25.907 1.00 86.88 C 4.325 7.637 -25.808 1.00 86.88 O 5.172 9.719 -23.582 1.00 86.88 C 4.965 10.835 -22.540 1.00 86.88 C 5.721 10.475 -21.261 1.00 86.88 C 5.486 12.187 -23.036 1.00 86.88 C 5.547 9.192 -26.900 1.00 83.80 N 6.029 8.261 -27.910 1.00 83.80 C 6.859 7.154 -27.248 1.00 83.80 C 7.845 7.414 -26.555 1.00 83.80 O 6.840 9.105 -28.898 1.00 83.80 C 7.311 10.292 -28.057 1.00 83.80 C 6.154 10.505 -27.083 1.00 83.80 C 6.464 5.899 -27.461 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style="display: none;"> 513,525,535,549,561,569,578,587,595,606,611,619,625,632,639,646,654,659,666,673,678,686,733,740,745,750,758,764,775,786,792,799,807,815,823,827,839,845,857,865,874,885,893,899,905,913,920,928,954,963,974,981,997,1004,1018,1028,1037,1049,1054,1062,1074,1082,1090,1094,1102,1106,1112,1117,1124,1130,1138,1149,1153,1161,1173,1182,1190,1199,1206,1235,1242,1249,1253,1261,1268,1277,1283,1291,1305,1313,1319,1325,1334,1343,1351,1359,1365,1374,1383,1391,1400,1405 146,154-158,166-475,485-576,586-1372,1382-1422 5.028,-89.933,89.933,0.450,20.000,-1.000,-0.000,0.000,0.000,-1.000,0.000,0.000,0.000,1.000 id="glmol01_viewbox" style="left: 30%; z-index:1;"> style="overflow: auto;"> type="radio" value="true" checked>Use imported representation
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References

[18, Phos]	Bai Y, Chen B, Li M, et al (2017) FPD: A comprehensive phosphorylation database in fungi. Fungal Biology 121:869–875. (Publication) (All modifications)
[18, Phos]	Frankovsky, J., Vozáriková, V., Nosek, J., Tomáška, Ľ. (2021a). Mitochondrial protein phosphorylation in yeast revisited.Mitochondrion 57:148-162. (Publication) (All modifications)
[20, Phos]	Bai Y, Chen B, Li M, et al (2017) FPD: A comprehensive phosphorylation database in fungi. Fungal Biology 121:869–875. (Publication) (All modifications)
[20, Phos]	Frankovsky, J., Vozáriková, V., Nosek, J., Tomáška, Ľ. (2021a). Mitochondrial protein phosphorylation in yeast revisited.Mitochondrion 57:148-162. (Publication) (All modifications)
[62, SUMO]	Paasch, F., den Brave, F., Psakhye, I., Pfander, B., Jentsch, S. (2018). Failed mitochondrial import and impaired proteostasis trigger SUMOylation of mitochondrial proteins. J Biol Chem 293: 599-609. (Publication) (All modifications)
[73, SUMO]	Paasch, F., den Brave, F., Psakhye, I., Pfander, B., Jentsch, S. (2018). Failed mitochondrial import and impaired proteostasis trigger SUMOylation of mitochondrial proteins. J Biol Chem 293: 599-609. (Publication) (All modifications)
[176, K-succ]	Frankovsky, J., Keresztesová, B., Bellová, J., et al. (2021). The yeast mitochondrial succinylome: Implications for regulation of mitochondrial nucleoids. Journal of Biological Chemistry, 297(4): 101155. (Publication) (All modifications)