Basic Information

NameCell wall protein SED1 (Glycoprotein GP260)
Uniprot IDQ01589
Systematic gene nameYDR077W
Standard gene nameSED1
Gene namesSED1 YDR077W D4431
Description from SGDYDR077W SED1 SGDID:S000002484, Chr IV from 600793-601809, Genome Release 64-3-1, Verified ORF, "Major stress-induced structural GPI-cell wall glycoprotein; associates with translating ribosomes, possible role in mitochondrial genome maintenance; ORF contains two distinct variable minisatellites; SED1 has a paralog, SPI1, that arose from the whole genome duplication"
Protein length338
Downloadsequence (fasta, from Uniprot), modifications (csv format)
Database linksUniprot, SGD, TheCellVision.org, FungiDB

Sequence

MKLSTVLLSA GLASTTLAQF SNSTSASSTD VTSSSSISTS SGSVTITSSE
APESDNGTST AAPTETSTEA PTTAIPTNGT STEAPTTAIP TNGTSTEAPT
DTTTEAPTTA LPTNGTSTEA PTDTTTEAPT TGLPTNGTTS AFPPTTSLPP
SNTTTTPPYN PSTDYTTDYT VVTEYTTYCP EPTTFTTNGK TYTVTEPTTL
TITDCPCTIE KPTTTSTTEY TVVTEYTTYC PEPTTFTTNG KTYTVTEPTT
LTITDCPCTI EKSEAPESSV PVTESKGTTT KETGVTTKQT TANPSLTVST
VVPVSSSASS HSVVINSNGA NVVVPGALGL AGVAMLFL

Legend

  • X Ubiquitination

Structure

Structure visualized by GLmol written by biochem_fan. The structure was downloaded from the AlphaFold Protein Structure Database.


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References

[276, Ubi]Swaney, D.L.,  Beltrao, P.,  Starita, L.,  Guo, A.,  Rush, J.,  Fields, S.,  Krogan, N.J.,  Villén, J. (2013). Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation. Nature Methods 10(7): 676-682. (Publication) (All modifications)
[281, Ubi]Swaney, D.L.,  Beltrao, P.,  Starita, L.,  Guo, A.,  Rush, J.,  Fields, S.,  Krogan, N.J.,  Villén, J. (2013). Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation. Nature Methods 10(7): 676-682. (Publication) (All modifications)