Q04299 y-mtPTM: Yeast Mitochondrial PTM Database

Basic Information

Name	Probable ADP-ribose 1''-phosphate phosphatase YML087W (EC 3.1.3.84)
Uniprot ID	Q04299
Systematic gene name	YMR087W
Standard gene name	PDL32
Gene names	PDL32 YMR087W YM9582.12
Description from SGD	YMR087W PDL32 SGDID:S000004693, Chr XIII from 442527-443381, Genome Release 64-3-1, Verified ORF, "Putative ADP-ribose-1''-monophosphatase; converts ADP-ribose-1''-monophosphate to ADP-ribose; may have a role in tRNA splicing; contains an A1pp domain"
Protein length	284
Download	sequence (fasta, from Uniprot), modifications (csv format)
Database links	Uniprot, SGD, TheCellVision.org, FungiDB

Sequence

MTGSLNRHSL LNGVKKMRII LCDTNEVVTN LWQESIPHAY IQNDKYLCIH
HGHLQSLMDS MRKGDAIHHG HSYAIVSPGN SYGYLGGGFD KALYNYFGGK
PFETWFRNQL GGRYHTVGSA TVVDLQRCLE EKTIECRDGI RYIIHVPTVV
APSAPIFNPQ NPLKTGFEPV FNAMWNALMH SPKDIDGLII PGLCTGYAGV
PPIISCKSMA FALRLYMAGD HISKELKNVL IMYYLQYPFE PFFPESCKIE
CQKLGIDIEM LKSFNVEKDA IELLIPRRIL TLDL

Legend

X Phoshorylation

Structure

Structure visualized

Loading structure by GLmol written by biochem_fan. The structure was downloaded from the AlphaFold Protein Structure Database. id="glmol01_src" style="display: none;"> -52.997 17.310 -10.217 1.00 37.37 N -51.821 17.646 -11.047 1.00 37.37 C -50.626 16.899 -10.477 1.00 37.37 C -49.995 17.368 -9.543 1.00 37.37 O -51.561 19.161 -11.080 1.00 37.37 C -52.699 19.956 -11.727 1.00 37.37 C -52.313 21.718 -11.836 1.00 37.37 S -53.976 22.438 -11.779 1.00 37.37 C -50.408 15.671 -10.934 1.00 38.29 N -49.384 14.759 -10.410 1.00 38.29 C -48.171 14.811 -11.330 1.00 38.29 C -48.148 14.164 -12.374 1.00 38.29 O -49.953 13.334 -10.298 1.00 38.29 C -50.915 13.220 -9.115 1.00 38.29 C -50.688 13.031 -11.463 1.00 38.29 O -47.194 15.643 -10.969 1.00 34.51 N -45.898 15.697 -11.637 1.00 34.51 C -45.059 14.482 -11.251 1.00 34.51 C -44.688 14.320 -10.092 1.00 34.51 O -44.785 13.626 -12.231 1.00 38.06 N -43.830 12.522 -12.149 1.00 38.06 C -42.428 13.060 -11.838 1.00 38.06 C -41.823 13.735 -12.671 1.00 38.06 O -43.858 11.788 -13.497 1.00 38.06 C -42.760 10.920 -13.649 1.00 38.06 O -41.907 12.752 -10.648 1.00 36.76 N -40.515 13.000 -10.268 1.00 36.76 C -39.579 12.152 -11.141 1.00 36.76 C -39.545 10.925 -11.053 1.00 36.76 O -40.333 12.705 -8.765 1.00 36.76 C -40.635 13.929 -7.877 1.00 36.76 C -41.167 13.496 -6.512 1.00 36.76 C -39.371 14.764 -7.659 1.00 36.76 C -38.824 12.841 -11.992 1.00 34.09 N -37.767 12.300 -12.837 1.00 34.09 C -36.690 11.621 -11.963 1.00 34.09 C -35.955 12.295 -11.246 1.00 34.09 O -37.200 13.482 -13.672 1.00 34.09 C -37.248 13.273 -15.174 1.00 34.09 C -37.052 14.318 -15.944 1.00 34.09 N -37.447 12.183 -15.674 1.00 34.09 O -36.563 10.289 -12.038 1.00 37.17 N -35.583 9.465 -11.290 1.00 37.17 C -34.125 9.592 -11.781 1.00 37.17 C -33.314 8.710 -11.530 1.00 37.17 O -36.050 7.990 -11.259 1.00 37.17 C -37.141 7.708 -10.218 1.00 37.17 C -37.414 6.197 -10.175 1.00 37.17 C -38.420 5.840 -9.157 1.00 37.17 N -38.792 4.612 -8.832 1.00 37.17 C -38.293 3.559 -9.418 1.00 37.17 N1+ -39.679 4.417 -7.898 1.00 37.17 N -33.760 10.681 -12.456 1.00 35.39 N -32.441 10.836 -13.088 1.00 35.39 C -31.534 11.924 -12.485 1.00 35.39 C -30.580 12.334 -13.136 1.00 35.39 O -32.596 10.884 -14.625 1.00 35.39 C -32.489 9.521 -15.271 1.00 35.39 C -33.204 9.061 -16.345 1.00 35.39 C -31.602 8.522 -14.926 1.00 35.39 N -31.790 7.485 -15.756 1.00 35.39 C -32.758 7.768 -16.638 1.00 35.39 N -31.754 12.365 -11.237 1.00 28.32 N -30.977 13.482 -10.656 1.00 28.32 C -30.275 13.235 -9.308 1.00 28.32 C -30.014 14.204 -8.600 1.00 28.32 O -31.834 14.754 -10.623 1.00 28.32 C -32.701 14.743 -9.509 1.00 28.32 O -29.947 11.996 -8.917 1.00 29.66 N -29.370 11.715 -7.580 1.00 29.66 C -27.944 11.135 -7.568 1.00 29.66 C -27.545 10.492 -6.609 1.00 29.66 O -30.387 10.943 -6.716 1.00 29.66 C -31.537 11.827 -6.194 1.00 29.66 C -32.609 10.941 -5.562 1.00 29.66 C -31.079 12.838 -5.136 1.00 29.66 C -27.136 11.430 -8.588 1.00 40.47 N -25.681 11.195 -8.569 1.00 40.47 C -24.927 12.462 -9.001 1.00 40.47 C -24.039 12.434 -9.850 1.00 40.47 O -25.337 9.960 -9.418 1.00 40.47 C -25.768 8.621 -8.791 1.00 40.47 C -25.826 7.584 -9.911 1.00 40.47 C -24.802 8.162 -7.696 1.00 40.47 C -25.320 13.612 -8.456 1.00 34.52 N -24.636 14.876 -8.715 1.00 34.52 C -23.404 15.001 -7.808 1.00 34.52 C -23.493 15.563 -6.722 1.00 34.52 O -25.625 16.047 -8.547 1.00 34.52 C -26.493 16.296 -9.767 1.00 34.52 C -27.530 17.085 -9.626 1.00 34.52 N -26.248 15.825 -10.864 1.00 34.52 O -22.242 14.524 -8.270 1.00 37.72 N -20.965 14.951 -7.681 1.00 37.72 C -19.720 14.148 -8.054 1.00 37.72 C -18.627 14.716 -8.101 1.00 37.72 O -19.860 12.856 -8.358 1.00 45.35 N -18.721 11.975 -8.654 1.00 45.35 C -19.023 11.194 -9.929 1.00 45.35 C -19.877 10.309 -9.938 1.00 45.35 O -18.397 11.055 -7.453 1.00 45.35 C -17.106 10.262 -7.693 1.00 45.35 C -18.196 11.857 -6.157 1.00 45.35 C -18.329 11.529 -11.027 1.00 53.07 N -18.258 10.664 -12.214 1.00 53.07 C -17.868 9.271 -11.715 1.00 53.07 C -16.852 9.153 -11.033 1.00 53.07 O -17.214 11.238 -13.192 1.00 53.07 C -17.083 10.439 -14.500 1.00 53.07 C -15.931 10.987 -15.357 1.00 53.07 C -15.744 10.133 -16.617 1.00 53.07 C -14.410 10.341 -17.224 1.00 53.07 N1+ -18.691 8.248 -11.977 1.00 68.89 N -18.461 6.900 -11.436 1.00 68.89 C -17.193 6.307 -12.056 1.00 68.89 C -17.230 5.754 -13.148 1.00 68.89 O -19.687 5.985 -11.614 1.00 68.89 C -20.887 6.405 -10.739 1.00 68.89 C -21.893 5.252 -10.606 1.00 68.89 C -23.133 5.618 -9.792 1.00 68.89 C -24.024 4.453 -9.549 1.00 68.89 N1+ -16.079 6.490 -11.357 1.00 86.44 N -14.774 5.926 -11.670 1.00 86.44 C -14.796 4.426 -11.394 1.00 86.44 C -15.238 3.993 -10.328 1.00 86.44 O -13.730 6.635 -10.798 1.00 86.44 C -12.302 6.116 -10.980 1.00 86.44 C -11.119 7.015 -9.946 1.00 86.44 S -11.451 6.330 -8.304 1.00 86.44 C -14.296 3.634 -12.337 1.00 88.94 N -14.136 2.196 -12.153 1.00 88.94 C -12.865 1.882 -11.372 1.00 88.94 C -11.801 2.394 -11.698 1.00 88.94 O -14.136 1.531 -13.524 1.00 88.94 C -14.111 0.016 -13.351 1.00 88.94 C -14.145 -0.616 -14.721 1.00 88.94 C -14.238 -2.071 -14.590 1.00 88.94 N -13.978 -2.918 -15.548 1.00 88.94 C -13.409 -2.494 -16.617 1.00 88.94 N1+ -14.327 -4.162 -15.484 1.00 88.94 N -12.942 0.984 -10.401 1.00 92.92 N -11.772 0.460 -9.697 1.00 92.92 C -11.345 -0.869 -10.326 1.00 92.92 C -12.166 -1.760 -10.530 1.00 92.92 O -12.068 0.323 -8.194 1.00 92.92 C -12.619 1.611 -7.542 1.00 92.92 C -10.801 -0.161 -7.467 1.00 92.92 C -11.717 2.840 -7.664 1.00 92.92 C -10.059 -1.018 -10.625 1.00 93.81 N -9.473 -2.246 -11.165 1.00 93.81 C -8.381 -2.698 -10.200 1.00 93.81 C -7.339 -2.056 -10.092 1.00 93.81 O -8.936 -2.027 -12.597 1.00 93.81 C -10.019 -1.454 -13.546 1.00 93.81 C -8.399 -3.366 -13.135 1.00 93.81 C -9.477 -0.994 -14.907 1.00 93.81 C -8.613 -3.794 -9.487 1.00 95.85 N -7.603 -4.415 -8.636 1.00 95.85 C -6.772 -5.378 -9.480 1.00 95.85 C -7.343 -6.201 -10.188 1.00 95.85 O -8.257 -5.110 -7.435 1.00 95.85 C -9.171 -4.207 -6.593 1.00 95.85 C -9.682 -4.983 -5.384 1.00 95.85 C -8.463 -2.947 -6.092 1.00 95.85 C -5.447 -5.277 -9.436 1.00 95.62 N -4.561 -6.061 -10.297 1.00 95.62 C -3.400 -6.650 -9.501 1.00 95.62 C -2.548 -5.908 -9.024 1.00 95.62 O -4.052 -5.158 -11.426 1.00 95.62 C -3.043 -6.112 -12.604 1.00 95.62 S -3.303 -7.971 -9.409 1.00 97.06 N -2.152 -8.614 -8.772 1.00 97.06 C -1.776 -9.913 -9.482 1.00 97.06 C -2.613 -10.574 -10.093 1.00 97.06 O -2.407 -8.828 -7.270 1.00 97.06 C -1.102 -8.780 -6.474 1.00 97.06 C -0.272 -9.701 -6.648 1.00 97.06 O -0.893 -7.791 -5.741 1.00 97.06 O1- -0.500 -10.277 -9.399 1.00 96.54 N 0.021 -11.557 -9.895 1.00 96.54 C -0.095 -12.672 -8.859 1.00 96.54 C 0.100 -13.834 -9.189 1.00 96.54 O 1.495 -11.421 -10.292 1.00 96.54 C 1.687 -10.502 -11.495 1.00 96.54 C 2.266 -10.867 -9.245 1.00 96.54 O -0.319 -12.327 -7.591 1.00 96.43 N -0.453 -13.277 -6.502 1.00 96.43 C -1.910 -13.735 -6.380 1.00 96.43 C -2.762 -13.001 -5.877 1.00 96.43 O 0.086 -12.623 -5.221 1.00 96.43 C 0.125 -13.575 -4.042 1.00 96.43 C 0.913 -13.268 -3.039 1.00 96.43 N -0.526 -14.603 -3.987 1.00 96.43 O -2.165 -14.980 -6.773 1.00 96.76 N -3.488 -15.604 -6.718 1.00 96.76 C -4.124 -15.550 -5.316 1.00 96.76 C -5.329 -15.345 -5.177 1.00 96.76 O -3.342 -17.059 -7.177 1.00 96.76 C -4.709 -17.696 -7.453 1.00 96.76 C -4.626 -19.175 -7.844 1.00 96.76 C -5.712 -19.791 -7.920 1.00 96.76 O -3.500 -19.682 -8.050 1.00 96.76 O1- -3.319 -15.660 -4.250 1.00 97.27 N -3.818 -15.570 -2.868 1.00 97.27 C -4.437 -14.197 -2.609 1.00 97.27 C -5.499 -14.107 -2.000 1.00 97.27 O -2.704 -15.857 -1.839 1.00 97.27 C -3.210 -15.757 -0.393 1.00 97.27 C -2.111 -17.259 -2.031 1.00 97.27 C -3.804 -13.123 -3.088 1.00 97.07 N -4.316 -11.751 -2.939 1.00 97.07 C -5.619 -11.587 -3.719 1.00 97.07 C -6.596 -11.069 -3.179 1.00 97.07 O -3.259 -10.722 -3.394 1.00 97.07 C -3.788 -9.286 -3.415 1.00 97.07 C -2.038 -10.745 -2.463 1.00 97.07 C -5.673 -12.071 -4.961 1.00 95.47 N -6.874 -11.932 -5.795 1.00 95.47 C -8.055 -12.731 -5.258 1.00 95.47 C -9.172 -12.215 -5.251 1.00 95.47 O -6.604 -12.292 -7.260 1.00 95.47 C -5.582 -11.328 -7.862 1.00 95.47 C -6.073 -13.585 -7.411 1.00 95.47 O -7.816 -13.939 -4.740 1.00 95.07 N -8.855 -14.764 -4.121 1.00 95.07 C -9.383 -14.102 -2.839 1.00 95.07 C -10.591 -13.972 -2.654 1.00 95.07 O -8.294 -16.176 -3.863 1.00 95.07 C -8.023 -16.951 -5.146 1.00 95.07 C -7.399 -18.103 -5.052 1.00 95.07 N -8.363 -16.536 -6.242 1.00 95.07 O -8.493 -13.566 -2.000 1.00 95.21 N -8.892 -12.834 -0.796 1.00 95.21 C -9.689 -11.562 -1.109 1.00 95.21 C -10.618 -11.229 -0.372 1.00 95.21 O -7.641 -12.483 0.014 1.00 95.21 C -7.017 -13.673 0.759 1.00 95.21 C -5.671 -13.216 1.321 1.00 95.21 C -7.898 -14.144 1.914 1.00 95.21 C -9.383 -10.837 -2.188 1.00 93.91 N -10.232 -9.727 -2.636 1.00 93.91 C -11.621 -10.196 -3.068 1.00 93.91 C -12.605 -9.538 -2.731 1.00 93.91 O -9.572 -8.970 -3.786 1.00 93.91 C -8.383 -8.138 -3.447 1.00 93.91 C -8.130 -7.517 -2.270 1.00 93.91 C -7.283 -7.790 -4.332 1.00 93.91 C -6.404 -6.923 -3.627 1.00 93.91 C -6.958 -8.095 -5.671 1.00 93.91 C -6.948 -6.811 -2.368 1.00 93.91 N -5.274 -6.364 -4.228 1.00 93.91 C -5.809 -7.557 -6.279 1.00 93.91 C -4.977 -6.679 -5.563 1.00 93.91 C -11.715 -11.331 -3.766 1.00 90.73 N -13.001 -11.892 -4.180 1.00 90.73 C -13.885 -12.288 -2.989 1.00 90.73 C -15.102 -12.127 -3.051 1.00 90.73 O -12.792 -13.097 -5.105 1.00 90.73 C -12.289 -12.706 -6.501 1.00 90.73 C -11.969 -13.919 -7.367 1.00 90.73 C -11.633 -13.724 -8.622 1.00 90.73 N -12.035 -15.063 -6.956 1.00 90.73 O -13.278 -12.768 -1.903 1.00 88.11 N -13.973 -13.130 -0.663 1.00 88.11 C -14.345 -11.908 0.192 1.00 88.11 C -15.432 -11.838 0.769 1.00 88.11 O -13.063 -14.052 0.161 1.00 88.11 C -12.851 -15.437 -0.469 1.00 88.11 C -11.831 -16.289 0.308 1.00 88.11 C -11.552 -17.415 -0.159 1.00 88.11 O -11.346 -15.827 1.369 1.00 88.11 O1- -13.431 -10.939 0.304 1.00 84.42 N -13.548 -9.824 1.253 1.00 84.42 C -14.282 -8.606 0.701 1.00 84.42 C -14.742 -7.767 1.481 1.00 84.42 O -12.172 -9.406 1.777 1.00 84.42 C -11.350 -8.940 0.729 1.00 84.42 O -14.435 -8.473 -0.615 1.00 82.47 N -15.192 -7.380 -1.227 1.00 82.47 C -16.593 -7.898 -1.582 1.00 82.47 C -16.714 -9.008 -2.092 1.00 82.47 O -14.434 -6.758 -2.415 1.00 82.47 C -13.014 -6.307 -1.992 1.00 82.47 C -15.233 -5.539 -2.903 1.00 82.47 C -12.113 -5.922 -3.169 1.00 82.47 C -17.683 -7.154 -1.300 1.00 67.56 N -19.032 -7.669 -1.497 1.00 67.56 C -19.237 -8.157 -2.931 1.00 67.56 C -19.025 -7.396 -3.877 1.00 67.56 O -19.985 -6.518 -1.155 1.00 67.56 C -19.155 -5.644 -0.225 1.00 67.56 C -17.740 -5.810 -0.759 1.00 67.56 C -19.724 -9.393 -3.081 1.00 61.84 N -20.010 -9.988 -4.391 1.00 61.84 C -20.874 -9.091 -5.280 1.00 61.84 C -20.690 -9.095 -6.488 1.00 61.84 O -20.726 -11.333 -4.214 1.00 61.84 C -19.860 -12.404 -3.612 1.00 61.84 C -20.129 -13.123 -2.481 1.00 61.84 C -18.663 -12.867 -4.112 1.00 61.84 N -18.214 -13.827 -3.287 1.00 61.84 C -19.083 -14.020 -2.280 1.00 61.84 N -21.760 -8.281 -4.694 1.00 52.32 N -22.592 -7.328 -5.421 1.00 52.32 C -21.777 -6.345 -6.290 1.00 52.32 C -22.219 -5.968 -7.372 1.00 52.32 O -23.438 -6.596 -4.372 1.00 52.32 C -20.570 -5.966 -5.857 1.00 62.96 N -19.681 -5.114 -6.648 1.00 62.96 C -18.865 -5.887 -7.669 1.00 62.96 C -18.663 -5.382 -8.763 1.00 62.96 O -18.743 -4.333 -5.733 1.00 62.96 C -19.448 -3.269 -4.933 1.00 62.96 C -20.177 -2.261 -5.594 1.00 62.96 C -19.329 -3.254 -3.537 1.00 62.96 C -20.790 -1.231 -4.862 1.00 62.96 C -19.889 -2.192 -2.814 1.00 62.96 C -20.632 -1.186 -3.467 1.00 62.96 C -21.172 -0.162 -2.760 1.00 62.96 O -18.434 -7.102 -7.332 1.00 59.53 N -17.676 -7.956 -8.255 1.00 59.53 C -18.576 -8.432 -9.403 1.00 59.53 C -18.142 -8.503 -10.541 1.00 59.53 O -17.042 -9.134 -7.484 1.00 59.53 C -16.072 -8.607 -6.398 1.00 59.53 C -16.304 -10.081 -8.451 1.00 59.53 C -15.627 -9.693 -5.419 1.00 59.53 C -19.855 -8.699 -9.133 1.00 59.24 N -20.843 -9.025 -10.166 1.00 59.24 C -21.176 -7.824 -11.056 1.00 59.24 C -21.674 -8.002 -12.167 1.00 59.24 O -22.122 -9.549 -9.501 1.00 59.24 C -21.928 -10.958 -8.925 1.00 59.24 C -23.175 -11.493 -8.230 1.00 59.24 C -23.172 -12.747 -7.837 1.00 59.24 N -24.167 -10.819 -8.010 1.00 59.24 O -20.908 -6.602 -10.588 1.00 65.75 N -21.033 -5.401 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43.58 O1- id="glmol01_rep" style="display: none;"> 172,375,383,389,397,407,571,577,589,594,602,609,615,622,626,954,961,968,975,1124,1136,1144,1152,1162,1169,1478,1482,1490,1498 233,241,255,264,273,294,304,309,321,329,431,439,448,454,462,470,478,484,492,503,688,699,707,716,721,729,741,749,761,780,789,796,807,816,823,837,848,859,867,876,983,991,1000,1034,1043,1052,1059,1067,1076,1278,1285,1293,1302,1309,1313,1324,1333,1340,1347,1358,1366,1371,1379,1393,1401,1406,1414,1422,1577,1584,1592,1600,1606,1612,1621,1627,1635,1640,1651,1656,1664,1675,1683,1695,1703,1744,1753,1762,1770,1779,1787,1794,1802,1810,1818,1830,1842,1889,1898,1905,1934,1943,1949,1955,1964,1972,1981,1987,1996,2005,2033,2041,2050,2058,2066,2075,2138,2146,2155,2163,2186,2197,2208,2216,2224,2231 901,914-923,931-941,948-2254 2-913,924-930,942-947 2.220,-55.484,55.484,0.450,20.000,-1.000,-0.000,0.000,0.000,-1.000,0.000,0.000,0.000,1.000 id="glmol01_viewbox" style="left: 30%; z-index:1;"> style="overflow: auto;"> type="radio" 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References

[114, Phos]	Bai Y, Chen B, Li M, et al (2017) FPD: A comprehensive phosphorylation database in fungi. Fungal Biology 121:869–875. (Publication) (All modifications)
[114, Phos]	Frankovsky, J., Vozáriková, V., Nosek, J., Tomáška, Ľ. (2021a). Mitochondrial protein phosphorylation in yeast revisited.Mitochondrion 57:148-162. (Publication) (All modifications)
[116, Phos]	Bai Y, Chen B, Li M, et al (2017) FPD: A comprehensive phosphorylation database in fungi. Fungal Biology 121:869–875. (Publication) (All modifications)
[116, Phos]	Frankovsky, J., Vozáriková, V., Nosek, J., Tomáška, Ľ. (2021a). Mitochondrial protein phosphorylation in yeast revisited.Mitochondrion 57:148-162. (Publication) (All modifications)
[119, Phos]	Bai Y, Chen B, Li M, et al (2017) FPD: A comprehensive phosphorylation database in fungi. Fungal Biology 121:869–875. (Publication) (All modifications)
[119, Phos]	Frankovsky, J., Vozáriková, V., Nosek, J., Tomáška, Ľ. (2021a). Mitochondrial protein phosphorylation in yeast revisited.Mitochondrion 57:148-162. (Publication) (All modifications)