Materials

Here is a preliminary plan of lectures for this year (the topics and their order may change):

2023-02-22	(BB)	ALL	Introduction to the course	Survey, Contact, Introduction, Rules, Connecting to server, Editors, Command-line basics
			Introduction to Perl	Lecture, Homework
2023-02-29	(BB)	ALL	Command-line tools, Perl one-liners	Lecture, Homework
2023-03-07	(TV)	ALL	Job scheduling and make	Lecture, Homework
2023-03-14	(TV)	ALL	SQL (and Python) for beginners	Project, Lecture, Python, Homework
2023-03-21	(VB)	INF/DAV	Python, web crawling, HTML parsing, sqlite3	Lecture, Homework, Screen
	(TV)	BIN	Bioinformatics 1 (sequencing and genome assembly)	Lecture, Homework
2023-03-28			Easter
2023-04-04	(VB)	INF/DAV	Text data processing, flask	Lecture, Homework
	(TV)	BIN	Bioinformatics 2 (gene finding, RNA-seq)	Lecture, Homework
2023-04-11	(BB)	INF/DAV	Data visualization in JavaScript	Lecture, Homework
			Project proposals due Friday April 12
	(TV)	BIN	Bioinformatics 3 (genome variants)	Lecture, Homework
2023-04-18			Student Research Conference
2023-04-25			No lecture
2023-05-02	(BB)	ALL	Python + C++	Lecture, Homework
2023-05-09	(VB)	ALL	Cloud computing	Lecture, Homework
2023-05-16			No lecture

Optional materials:

• If you are interested in R language, you can look at these lectures and homeworks. Files for the tasks are available on the server. However do not submit these homeworks.
  • Lr1, HWr1 tutorial to R and basic plotting
  • Lr2, HWr2 statistical tests in R