Computational Biology
@ Comenius University in Bratislava

Petra Kubincová. Mapping between Genomes. Bachelor thesis, Comenius University in Bratislava, 2014. Supervised by Broňa Brejová.

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Abstract:

In this thesis we focus on the problem of mapping regions between
genomes. The goal is to desing and implement a practical tool for
efficiently mapping genomic regions from one genome to another,
based on genomic alignments computed by existing programs. We
propose representation of the alignment data and file formats
allowing efficient data access, and discuss theoretical problems
related to mapping. We also describe similar existing tools and
compare them with our tool.